Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_747 and HP15_748 are separated by 257 nucleotides HP15_748 and HP15_749 are separated by 9 nucleotides
HP15_747: HP15_747 - integral membrane sensor signal transduction histidine kinase, at 755,407 to 756,882
_747
HP15_748: HP15_748 - glycerol kinase, at 757,140 to 758,621
_748
HP15_749: HP15_749 - iron(III) ABC transporter, ATP-binding protein, at 758,631 to 759,704
_749
Position (kb) 757
758
759 Strain fitness (log2 ratio) -2
-1
0
1
2 at 756.243 kb on - strand, within HP15_747 at 756.314 kb on + strand, within HP15_747 at 756.317 kb on - strand, within HP15_747 at 756.342 kb on - strand, within HP15_747 at 756.509 kb on + strand, within HP15_747 at 756.851 kb on - strand at 756.872 kb on + strand at 756.877 kb on + strand at 756.891 kb on + strand at 756.896 kb on + strand at 756.954 kb on + strand at 756.959 kb on + strand at 756.962 kb on - strand at 757.169 kb on + strand at 757.336 kb on - strand, within HP15_748 at 757.406 kb on - strand, within HP15_748 at 757.683 kb on - strand, within HP15_748 at 757.727 kb on + strand, within HP15_748 at 757.735 kb on - strand, within HP15_748 at 757.803 kb on + strand, within HP15_748 at 757.803 kb on + strand, within HP15_748 at 757.887 kb on + strand, within HP15_748 at 757.961 kb on + strand, within HP15_748 at 758.045 kb on - strand, within HP15_748 at 758.070 kb on + strand, within HP15_748 at 758.089 kb on + strand, within HP15_748 at 758.205 kb on + strand, within HP15_748 at 758.390 kb on + strand, within HP15_748 at 758.497 kb on + strand at 759.025 kb on + strand, within HP15_749 at 759.173 kb on - strand, within HP15_749 at 759.270 kb on - strand, within HP15_749 at 759.458 kb on + strand, within HP15_749
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 756,243 - HP15_747 0.57 -1.3 756,314 + HP15_747 0.61 -1.7 756,317 - HP15_747 0.62 -1.7 756,342 - HP15_747 0.63 -0.6 756,509 + HP15_747 0.75 +0.2 756,851 - -0.5 756,872 + +0.1 756,877 + -0.9 756,891 + -0.1 756,896 + -0.1 756,954 + +0.9 756,959 + -0.3 756,962 - +0.1 757,169 + +1.2 757,336 - HP15_748 0.13 +0.7 757,406 - HP15_748 0.18 +0.2 757,683 - HP15_748 0.37 -0.4 757,727 + HP15_748 0.40 +0.8 757,735 - HP15_748 0.40 +0.9 757,803 + HP15_748 0.45 +2.0 757,803 + HP15_748 0.45 +1.4 757,887 + HP15_748 0.50 +2.1 757,961 + HP15_748 0.55 +1.2 758,045 - HP15_748 0.61 +1.1 758,070 + HP15_748 0.63 +1.0 758,089 + HP15_748 0.64 -0.0 758,205 + HP15_748 0.72 +1.2 758,390 + HP15_748 0.84 +1.9 758,497 + +1.5 759,025 + HP15_749 0.37 -2.0 759,173 - HP15_749 0.50 +0.2 759,270 - HP15_749 0.59 +0.2 759,458 + HP15_749 0.77 -0.7
Or see this region's nucleotide sequence