Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_p187g14 and HP15_p187g15 overlap by 4 nucleotides HP15_p187g15 and HP15_p187g16 overlap by 1 nucleotides HP15_p187g16 and HP15_p187g17 are separated by 23 nucleotides HP15_p187g17 and HP15_p187g18 are separated by 80 nucleotides
HP15_p187g14: HP15_p187g14 - protein containing sporulation stage II, protein E C-terminal domain, at 12,263 to 14,635
_p187g14
HP15_p187g15: HP15_p187g15 - serine phosphatase RsbU-like protein, regulator of sigma, at 14,632 to 15,051
_p187g15
HP15_p187g16: HP15_p187g16 - anti-sigma F factor antagonist, at 15,051 to 15,416
_p187g16
HP15_p187g17: HP15_p187g17 - conserved hypothetical protein, at 15,440 to 15,838
_p187g17
HP15_p187g18: HP15_p187g18 - hypothetical protein, at 15,919 to 16,161
_p187g18
Position (kb) 14
15
16 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 13.680 kb on - strand, within HP15_p187g14 at 13.690 kb on - strand, within HP15_p187g14 at 13.690 kb on - strand, within HP15_p187g14 at 13.695 kb on - strand, within HP15_p187g14 at 13.724 kb on - strand, within HP15_p187g14 at 13.773 kb on + strand, within HP15_p187g14 at 13.776 kb on + strand, within HP15_p187g14 at 13.849 kb on + strand, within HP15_p187g14 at 13.978 kb on - strand, within HP15_p187g14 at 14.021 kb on - strand, within HP15_p187g14 at 14.091 kb on - strand, within HP15_p187g14 at 14.099 kb on + strand, within HP15_p187g14 at 14.124 kb on - strand, within HP15_p187g14 at 14.124 kb on - strand, within HP15_p187g14 at 14.148 kb on - strand, within HP15_p187g14 at 14.164 kb on + strand, within HP15_p187g14 at 14.164 kb on + strand, within HP15_p187g14 at 14.172 kb on - strand, within HP15_p187g14 at 14.187 kb on + strand, within HP15_p187g14 at 14.187 kb on - strand, within HP15_p187g14 at 14.200 kb on - strand, within HP15_p187g14 at 14.207 kb on - strand, within HP15_p187g14 at 14.219 kb on - strand, within HP15_p187g14 at 14.243 kb on + strand, within HP15_p187g14 at 14.322 kb on - strand, within HP15_p187g14 at 14.337 kb on - strand, within HP15_p187g14 at 14.363 kb on - strand, within HP15_p187g14 at 14.419 kb on - strand at 14.439 kb on + strand at 14.491 kb on + strand at 14.491 kb on + strand at 14.526 kb on - strand at 14.584 kb on - strand at 14.609 kb on + strand at 14.617 kb on - strand at 14.636 kb on + strand at 14.749 kb on + strand, within HP15_p187g15 at 14.859 kb on + strand, within HP15_p187g15 at 14.870 kb on + strand, within HP15_p187g15 at 14.992 kb on + strand, within HP15_p187g15 at 15.002 kb on - strand, within HP15_p187g15 at 15.083 kb on + strand at 15.096 kb on + strand, within HP15_p187g16 at 15.113 kb on - strand, within HP15_p187g16 at 15.140 kb on + strand, within HP15_p187g16 at 15.175 kb on + strand, within HP15_p187g16 at 15.228 kb on + strand, within HP15_p187g16 at 15.266 kb on + strand, within HP15_p187g16 at 15.274 kb on - strand, within HP15_p187g16 at 15.274 kb on - strand, within HP15_p187g16 at 15.336 kb on - strand, within HP15_p187g16 at 15.411 kb on + strand at 15.419 kb on - strand at 15.432 kb on + strand at 15.433 kb on - strand at 15.463 kb on - strand at 15.467 kb on + strand at 15.545 kb on + strand, within HP15_p187g17 at 15.610 kb on - strand, within HP15_p187g17 at 15.610 kb on - strand, within HP15_p187g17 at 15.617 kb on + strand, within HP15_p187g17 at 15.631 kb on - strand, within HP15_p187g17 at 15.639 kb on - strand, within HP15_p187g17 at 15.653 kb on - strand, within HP15_p187g17 at 15.713 kb on + strand, within HP15_p187g17 at 15.713 kb on + strand, within HP15_p187g17 at 15.715 kb on + strand, within HP15_p187g17 at 15.741 kb on - strand, within HP15_p187g17 at 15.882 kb on + strand at 15.961 kb on - strand, within HP15_p187g18 at 15.979 kb on - strand, within HP15_p187g18 at 15.979 kb on - strand, within HP15_p187g18 at 15.981 kb on + strand, within HP15_p187g18 at 16.029 kb on + strand, within HP15_p187g18 at 16.029 kb on + strand, within HP15_p187g18 at 16.029 kb on + strand, within HP15_p187g18 at 16.029 kb on + strand, within HP15_p187g18 at 16.029 kb on + strand, within HP15_p187g18 at 16.037 kb on - strand, within HP15_p187g18 at 16.037 kb on - strand, within HP15_p187g18 at 16.037 kb on - strand, within HP15_p187g18 at 16.037 kb on - strand, within HP15_p187g18 at 16.041 kb on + strand, within HP15_p187g18 at 16.041 kb on + strand, within HP15_p187g18 at 16.049 kb on - strand, within HP15_p187g18 at 16.051 kb on + strand, within HP15_p187g18
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 13,680 - HP15_p187g14 0.60 -0.2 13,690 - HP15_p187g14 0.60 -0.5 13,690 - HP15_p187g14 0.60 +0.0 13,695 - HP15_p187g14 0.60 -0.0 13,724 - HP15_p187g14 0.62 -0.2 13,773 + HP15_p187g14 0.64 +2.1 13,776 + HP15_p187g14 0.64 -0.0 13,849 + HP15_p187g14 0.67 +1.0 13,978 - HP15_p187g14 0.72 -0.8 14,021 - HP15_p187g14 0.74 +1.0 14,091 - HP15_p187g14 0.77 -0.0 14,099 + HP15_p187g14 0.77 -0.3 14,124 - HP15_p187g14 0.78 -1.0 14,124 - HP15_p187g14 0.78 +0.7 14,148 - HP15_p187g14 0.79 -0.5 14,164 + HP15_p187g14 0.80 +0.6 14,164 + HP15_p187g14 0.80 +0.4 14,172 - HP15_p187g14 0.80 -0.4 14,187 + HP15_p187g14 0.81 +0.6 14,187 - HP15_p187g14 0.81 -0.3 14,200 - HP15_p187g14 0.82 -0.8 14,207 - HP15_p187g14 0.82 -1.4 14,219 - HP15_p187g14 0.82 +0.1 14,243 + HP15_p187g14 0.83 -0.0 14,322 - HP15_p187g14 0.87 +0.1 14,337 - HP15_p187g14 0.87 -0.5 14,363 - HP15_p187g14 0.88 -0.1 14,419 - +0.1 14,439 + +1.2 14,491 + +0.6 14,491 + -0.4 14,526 - +0.3 14,584 - +0.5 14,609 + +1.6 14,617 - +0.1 14,636 + +0.8 14,749 + HP15_p187g15 0.28 +1.7 14,859 + HP15_p187g15 0.54 +2.7 14,870 + HP15_p187g15 0.57 +0.0 14,992 + HP15_p187g15 0.86 +0.8 15,002 - HP15_p187g15 0.88 -2.0 15,083 + -0.2 15,096 + HP15_p187g16 0.12 -1.0 15,113 - HP15_p187g16 0.17 +0.6 15,140 + HP15_p187g16 0.24 +0.1 15,175 + HP15_p187g16 0.34 +0.1 15,228 + HP15_p187g16 0.48 +1.1 15,266 + HP15_p187g16 0.59 -0.3 15,274 - HP15_p187g16 0.61 -0.3 15,274 - HP15_p187g16 0.61 -1.0 15,336 - HP15_p187g16 0.78 +0.1 15,411 + -0.5 15,419 - -1.0 15,432 + +0.1 15,433 - -0.3 15,463 - +0.4 15,467 + -0.0 15,545 + HP15_p187g17 0.26 -1.5 15,610 - HP15_p187g17 0.43 +0.7 15,610 - HP15_p187g17 0.43 -0.4 15,617 + HP15_p187g17 0.44 -0.3 15,631 - HP15_p187g17 0.48 +0.5 15,639 - HP15_p187g17 0.50 +0.0 15,653 - HP15_p187g17 0.53 +0.3 15,713 + HP15_p187g17 0.68 +0.4 15,713 + HP15_p187g17 0.68 +0.5 15,715 + HP15_p187g17 0.69 -0.3 15,741 - HP15_p187g17 0.75 +0.2 15,882 + -0.9 15,961 - HP15_p187g18 0.17 -1.8 15,979 - HP15_p187g18 0.25 -2.8 15,979 - HP15_p187g18 0.25 -1.0 15,981 + HP15_p187g18 0.26 -2.1 16,029 + HP15_p187g18 0.45 -2.6 16,029 + HP15_p187g18 0.45 -2.0 16,029 + HP15_p187g18 0.45 -2.4 16,029 + HP15_p187g18 0.45 -2.0 16,029 + HP15_p187g18 0.45 -1.6 16,037 - HP15_p187g18 0.49 -2.4 16,037 - HP15_p187g18 0.49 -1.8 16,037 - HP15_p187g18 0.49 -2.6 16,037 - HP15_p187g18 0.49 -0.4 16,041 + HP15_p187g18 0.50 -2.4 16,041 + HP15_p187g18 0.50 -2.6 16,049 - HP15_p187g18 0.53 -3.2 16,051 + HP15_p187g18 0.54 -1.0
Or see this region's nucleotide sequence