Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3864 and HP15_3865 are separated by 2 nucleotides HP15_3865 and HP15_3866 are separated by 143 nucleotides HP15_3866 and HP15_3867 are separated by 14 nucleotides
HP15_3864: HP15_3864 - secreted protein containing DUF748, at 4,089,337 to 4,092,162
_3864
HP15_3865: HP15_3865 - periplasmic binding protein, at 4,092,165 to 4,092,953
_3865
HP15_3866: HP15_3866 - metal dependent phosphohydrolase, at 4,093,097 to 4,093,690
_3866
HP15_3867: HP15_3867 - SPFH domain, Band 7 family protein, at 4,093,705 to 4,094,739
_3867
Position (kb)
4093
4094 Strain fitness (log2 ratio)
-1
0
1 at 4092.117 kb on - strand at 4092.140 kb on + strand at 4092.201 kb on + strand at 4092.340 kb on - strand, within HP15_3865 at 4092.395 kb on + strand, within HP15_3865 at 4092.445 kb on + strand, within HP15_3865 at 4092.453 kb on - strand, within HP15_3865 at 4092.566 kb on + strand, within HP15_3865 at 4092.578 kb on + strand, within HP15_3865 at 4092.628 kb on + strand, within HP15_3865 at 4092.690 kb on - strand, within HP15_3865 at 4092.762 kb on + strand, within HP15_3865 at 4092.798 kb on - strand, within HP15_3865 at 4093.139 kb on - strand at 4093.209 kb on - strand, within HP15_3866 at 4093.270 kb on - strand, within HP15_3866 at 4093.311 kb on + strand, within HP15_3866 at 4093.319 kb on - strand, within HP15_3866 at 4093.388 kb on + strand, within HP15_3866 at 4093.498 kb on + strand, within HP15_3866 at 4093.506 kb on - strand, within HP15_3866 at 4093.506 kb on - strand, within HP15_3866 at 4093.664 kb on - strand at 4093.664 kb on - strand at 4093.675 kb on - strand at 4093.824 kb on - strand, within HP15_3867 at 4093.824 kb on - strand, within HP15_3867 at 4093.871 kb on + strand, within HP15_3867 at 4093.996 kb on + strand, within HP15_3867 at 4094.059 kb on - strand, within HP15_3867 at 4094.180 kb on + strand, within HP15_3867 at 4094.251 kb on - strand, within HP15_3867 at 4094.310 kb on + strand, within HP15_3867 at 4094.320 kb on + strand, within HP15_3867 at 4094.520 kb on - strand, within HP15_3867 at 4094.631 kb on + strand, within HP15_3867 at 4094.665 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 4,092,117 - -0.3 4,092,140 + -1.2 4,092,201 + -0.5 4,092,340 - HP15_3865 0.22 -0.3 4,092,395 + HP15_3865 0.29 +0.3 4,092,445 + HP15_3865 0.35 -0.1 4,092,453 - HP15_3865 0.37 +0.3 4,092,566 + HP15_3865 0.51 +0.2 4,092,578 + HP15_3865 0.52 +0.3 4,092,628 + HP15_3865 0.59 +0.4 4,092,690 - HP15_3865 0.67 +0.1 4,092,762 + HP15_3865 0.76 +0.4 4,092,798 - HP15_3865 0.80 -0.0 4,093,139 - +0.1 4,093,209 - HP15_3866 0.19 +0.3 4,093,270 - HP15_3866 0.29 +0.6 4,093,311 + HP15_3866 0.36 +0.1 4,093,319 - HP15_3866 0.37 +0.9 4,093,388 + HP15_3866 0.49 +1.5 4,093,498 + HP15_3866 0.68 +0.3 4,093,506 - HP15_3866 0.69 +0.1 4,093,506 - HP15_3866 0.69 -0.0 4,093,664 - -0.7 4,093,664 - -0.4 4,093,675 - +0.1 4,093,824 - HP15_3867 0.11 +0.4 4,093,824 - HP15_3867 0.11 -0.8 4,093,871 + HP15_3867 0.16 +0.1 4,093,996 + HP15_3867 0.28 +0.3 4,094,059 - HP15_3867 0.34 -0.4 4,094,180 + HP15_3867 0.46 -0.2 4,094,251 - HP15_3867 0.53 -0.1 4,094,310 + HP15_3867 0.58 -0.1 4,094,320 + HP15_3867 0.59 -0.0 4,094,520 - HP15_3867 0.79 +0.7 4,094,631 + HP15_3867 0.89 +0.5 4,094,665 - +0.5
Or see this region's nucleotide sequence