Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3741 and HP15_3742 overlap by 4 nucleotides HP15_3742 and HP15_3743 are separated by 22 nucleotides
HP15_3741: HP15_3741 - potassium transporter peripheral membrane component, at 3,962,711 to 3,964,114
_3741
HP15_3742: HP15_3742 - Fmu, rRNA SAM-dependent methyltransferase, at 3,964,111 to 3,965,391
_3742
HP15_3743: HP15_3743 - methionyl-tRNA formyltransferase, at 3,965,414 to 3,966,349
_3743
Position (kb)
3964
3965
3966 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3964.126 kb on + strand at 3964.134 kb on - strand at 3964.136 kb on + strand at 3964.149 kb on + strand at 3964.167 kb on - strand at 3964.497 kb on - strand, within HP15_3742 at 3964.624 kb on + strand, within HP15_3742 at 3964.688 kb on - strand, within HP15_3742 at 3964.721 kb on + strand, within HP15_3742 at 3964.721 kb on + strand, within HP15_3742 at 3964.721 kb on + strand, within HP15_3742 at 3964.725 kb on + strand, within HP15_3742 at 3964.729 kb on - strand, within HP15_3742 at 3964.906 kb on + strand, within HP15_3742 at 3965.050 kb on - strand, within HP15_3742 at 3965.054 kb on + strand, within HP15_3742 at 3965.068 kb on + strand, within HP15_3742 at 3965.160 kb on + strand, within HP15_3742 at 3965.168 kb on + strand, within HP15_3742 at 3965.252 kb on - strand, within HP15_3742 at 3965.430 kb on - strand at 3966.359 kb on - strand at 3966.361 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 3,964,126 + -0.0 3,964,134 - +2.6 3,964,136 + +0.1 3,964,149 + -2.2 3,964,167 - +0.4 3,964,497 - HP15_3742 0.30 +0.9 3,964,624 + HP15_3742 0.40 +0.4 3,964,688 - HP15_3742 0.45 +0.1 3,964,721 + HP15_3742 0.48 -0.5 3,964,721 + HP15_3742 0.48 -0.9 3,964,721 + HP15_3742 0.48 +0.3 3,964,725 + HP15_3742 0.48 +0.6 3,964,729 - HP15_3742 0.48 +1.1 3,964,906 + HP15_3742 0.62 +1.1 3,965,050 - HP15_3742 0.73 +0.2 3,965,054 + HP15_3742 0.74 -0.4 3,965,068 + HP15_3742 0.75 +0.6 3,965,160 + HP15_3742 0.82 +2.1 3,965,168 + HP15_3742 0.83 +0.1 3,965,252 - HP15_3742 0.89 +1.0 3,965,430 - +0.2 3,966,359 - +1.2 3,966,361 - +0.5
Or see this region's nucleotide sequence