Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3737 and HP15_tRNA50 are separated by 98 nucleotides HP15_tRNA50 and HP15_3738 are separated by 35 nucleotides HP15_3738 and HP15_3739 are separated by 28 nucleotides
HP15_3737: HP15_3737 - phospholipase D/transphosphatidylase, at 3,957,144 to 3,958,700
_3737
HP15_tRNA50: HP15_tRNA50 - tRNA-Pro, at 3,958,799 to 3,958,875
_tRNA50
HP15_3738: HP15_3738 - histidinol-phosphate phosphatase family protein, at 3,958,911 to 3,959,468
_3738
HP15_3739: HP15_3739 - glycyl-tRNA synthetase beta subunit, at 3,959,497 to 3,961,578
_3739
Position (kb)
3958
3959 Strain fitness (log2 ratio)
-1
0
1
2 at 3957.815 kb on + strand, within HP15_3737 at 3957.818 kb on - strand, within HP15_3737 at 3957.828 kb on - strand, within HP15_3737 at 3958.059 kb on + strand, within HP15_3737 at 3958.104 kb on + strand, within HP15_3737 at 3958.132 kb on - strand, within HP15_3737 at 3958.153 kb on - strand, within HP15_3737 at 3958.206 kb on + strand, within HP15_3737 at 3958.216 kb on - strand, within HP15_3737 at 3958.241 kb on + strand, within HP15_3737 at 3958.489 kb on + strand, within HP15_3737 at 3958.823 kb on - strand, within HP15_tRNA50 at 3958.973 kb on + strand, within HP15_3738 at 3959.040 kb on - strand, within HP15_3738 at 3959.111 kb on + strand, within HP15_3738 at 3959.119 kb on - strand, within HP15_3738 at 3959.241 kb on - strand, within HP15_3738 at 3959.282 kb on + strand, within HP15_3738 at 3959.355 kb on - strand, within HP15_3738 at 3959.379 kb on + strand, within HP15_3738 at 3959.473 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 3,957,815 + HP15_3737 0.43 -0.2 3,957,818 - HP15_3737 0.43 +0.4 3,957,828 - HP15_3737 0.44 +0.4 3,958,059 + HP15_3737 0.59 -0.1 3,958,104 + HP15_3737 0.62 +0.7 3,958,132 - HP15_3737 0.63 +0.3 3,958,153 - HP15_3737 0.65 -0.3 3,958,206 + HP15_3737 0.68 -0.1 3,958,216 - HP15_3737 0.69 +1.0 3,958,241 + HP15_3737 0.70 -0.0 3,958,489 + HP15_3737 0.86 +0.7 3,958,823 - HP15_tRNA50 0.31 +1.0 3,958,973 + HP15_3738 0.11 +0.0 3,959,040 - HP15_3738 0.23 +0.0 3,959,111 + HP15_3738 0.36 -0.2 3,959,119 - HP15_3738 0.37 -0.2 3,959,241 - HP15_3738 0.59 +0.1 3,959,282 + HP15_3738 0.66 +2.6 3,959,355 - HP15_3738 0.80 -0.4 3,959,379 + HP15_3738 0.84 -0.0 3,959,473 - -0.6
Or see this region's nucleotide sequence