Strain Fitness in Marinobacter adhaerens HP15 around HP15_tRNA50

Experiment: L-Glutamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3737 and HP15_tRNA50 are separated by 98 nucleotidesHP15_tRNA50 and HP15_3738 are separated by 35 nucleotidesHP15_3738 and HP15_3739 are separated by 28 nucleotides HP15_3737: HP15_3737 - phospholipase D/transphosphatidylase, at 3,957,144 to 3,958,700 _3737 HP15_tRNA50: HP15_tRNA50 - tRNA-Pro, at 3,958,799 to 3,958,875 _tRNA50 HP15_3738: HP15_3738 - histidinol-phosphate phosphatase family protein, at 3,958,911 to 3,959,468 _3738 HP15_3739: HP15_3739 - glycyl-tRNA synthetase beta subunit, at 3,959,497 to 3,961,578 _3739 Position (kb) 3958 3959Strain fitness (log2 ratio) -1 0 1 2at 3957.815 kb on + strand, within HP15_3737at 3957.818 kb on - strand, within HP15_3737at 3957.828 kb on - strand, within HP15_3737at 3958.059 kb on + strand, within HP15_3737at 3958.104 kb on + strand, within HP15_3737at 3958.132 kb on - strand, within HP15_3737at 3958.153 kb on - strand, within HP15_3737at 3958.206 kb on + strand, within HP15_3737at 3958.216 kb on - strand, within HP15_3737at 3958.241 kb on + strand, within HP15_3737at 3958.489 kb on + strand, within HP15_3737at 3958.823 kb on - strand, within HP15_tRNA50at 3958.973 kb on + strand, within HP15_3738at 3959.040 kb on - strand, within HP15_3738at 3959.111 kb on + strand, within HP15_3738at 3959.119 kb on - strand, within HP15_3738at 3959.241 kb on - strand, within HP15_3738at 3959.282 kb on + strand, within HP15_3738at 3959.355 kb on - strand, within HP15_3738at 3959.379 kb on + strand, within HP15_3738at 3959.473 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N)
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3,957,815 + HP15_3737 0.43 -0.2
3,957,818 - HP15_3737 0.43 +0.4
3,957,828 - HP15_3737 0.44 +0.4
3,958,059 + HP15_3737 0.59 -0.1
3,958,104 + HP15_3737 0.62 +0.7
3,958,132 - HP15_3737 0.63 +0.3
3,958,153 - HP15_3737 0.65 -0.3
3,958,206 + HP15_3737 0.68 -0.1
3,958,216 - HP15_3737 0.69 +1.0
3,958,241 + HP15_3737 0.70 -0.0
3,958,489 + HP15_3737 0.86 +0.7
3,958,823 - HP15_tRNA50 0.31 +1.0
3,958,973 + HP15_3738 0.11 +0.0
3,959,040 - HP15_3738 0.23 +0.0
3,959,111 + HP15_3738 0.36 -0.2
3,959,119 - HP15_3738 0.37 -0.2
3,959,241 - HP15_3738 0.59 +0.1
3,959,282 + HP15_3738 0.66 +2.6
3,959,355 - HP15_3738 0.80 -0.4
3,959,379 + HP15_3738 0.84 -0.0
3,959,473 - -0.6

Or see this region's nucleotide sequence