Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3584 and HP15_3585 are separated by 110 nucleotides HP15_3585 and HP15_3586 are separated by 10 nucleotides
HP15_3584: HP15_3584 - transcriptional regulator, LysR family protein, at 3,775,095 to 3,776,042
_3584
HP15_3585: HP15_3585 - hypothetical protein, at 3,776,153 to 3,776,260
_3585
HP15_3586: HP15_3586 - membrane protein containing DUF6, transmembrane, at 3,776,271 to 3,777,221
_3586
Position (kb)
3776
3777 Strain fitness (log2 ratio)
-1
0
1
2 at 3775.294 kb on - strand, within HP15_3584 at 3775.442 kb on + strand, within HP15_3584 at 3775.514 kb on + strand, within HP15_3584 at 3775.542 kb on - strand, within HP15_3584 at 3775.654 kb on - strand, within HP15_3584 at 3775.657 kb on + strand, within HP15_3584 at 3775.660 kb on - strand, within HP15_3584 at 3775.744 kb on - strand, within HP15_3584 at 3775.769 kb on - strand, within HP15_3584 at 3775.810 kb on + strand, within HP15_3584 at 3775.882 kb on - strand, within HP15_3584 at 3775.912 kb on + strand, within HP15_3584 at 3775.981 kb on - strand at 3776.183 kb on + strand, within HP15_3585 at 3776.195 kb on - strand, within HP15_3585 at 3776.249 kb on - strand, within HP15_3585 at 3776.283 kb on + strand at 3776.482 kb on + strand, within HP15_3586 at 3776.503 kb on - strand, within HP15_3586 at 3776.516 kb on + strand, within HP15_3586 at 3776.780 kb on + strand, within HP15_3586 at 3776.926 kb on + strand, within HP15_3586 at 3776.988 kb on + strand, within HP15_3586 at 3776.988 kb on + strand, within HP15_3586 at 3776.988 kb on + strand, within HP15_3586 at 3776.996 kb on - strand, within HP15_3586 at 3776.996 kb on - strand, within HP15_3586 at 3777.093 kb on + strand, within HP15_3586 at 3777.179 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 3,775,294 - HP15_3584 0.21 +0.5 3,775,442 + HP15_3584 0.37 +1.0 3,775,514 + HP15_3584 0.44 +0.8 3,775,542 - HP15_3584 0.47 +0.6 3,775,654 - HP15_3584 0.59 -0.1 3,775,657 + HP15_3584 0.59 -0.4 3,775,660 - HP15_3584 0.60 -0.1 3,775,744 - HP15_3584 0.68 -0.2 3,775,769 - HP15_3584 0.71 -0.3 3,775,810 + HP15_3584 0.75 -0.5 3,775,882 - HP15_3584 0.83 -0.3 3,775,912 + HP15_3584 0.86 +0.3 3,775,981 - -0.1 3,776,183 + HP15_3585 0.28 +1.5 3,776,195 - HP15_3585 0.39 +1.4 3,776,249 - HP15_3585 0.89 +0.4 3,776,283 + +1.8 3,776,482 + HP15_3586 0.22 +0.4 3,776,503 - HP15_3586 0.24 -0.1 3,776,516 + HP15_3586 0.26 -0.4 3,776,780 + HP15_3586 0.54 -0.2 3,776,926 + HP15_3586 0.69 +0.2 3,776,988 + HP15_3586 0.75 +0.5 3,776,988 + HP15_3586 0.75 +1.2 3,776,988 + HP15_3586 0.75 -0.3 3,776,996 - HP15_3586 0.76 +0.6 3,776,996 - HP15_3586 0.76 +0.4 3,777,093 + HP15_3586 0.86 -0.3 3,777,179 - +0.7
Or see this region's nucleotide sequence