Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_336 and HP15_337 are separated by 108 nucleotides HP15_337 and HP15_338 overlap by 20 nucleotides
HP15_336: HP15_336 - conserved hypothetical protein, at 331,871 to 333,457
_336
HP15_337: HP15_337 - hypothetical protein, at 333,566 to 333,688
_337
HP15_338: HP15_338 - penicillin-binding protein 1B, at 333,669 to 335,909
_338
Position (kb) 333
334 Strain fitness (log2 ratio) -1
0
1 at 332.675 kb on + strand, within HP15_336 at 332.675 kb on + strand, within HP15_336 at 332.713 kb on + strand, within HP15_336 at 332.793 kb on + strand, within HP15_336 at 332.934 kb on + strand, within HP15_336 at 333.012 kb on + strand, within HP15_336 at 333.240 kb on + strand, within HP15_336 at 333.240 kb on + strand, within HP15_336 at 333.245 kb on + strand, within HP15_336 at 333.406 kb on + strand at 333.406 kb on + strand at 333.414 kb on - strand at 333.414 kb on - strand at 333.414 kb on - strand at 333.414 kb on - strand at 333.455 kb on - strand at 333.475 kb on + strand at 333.618 kb on - strand, within HP15_337 at 333.691 kb on + strand at 333.709 kb on + strand at 333.801 kb on - strand at 333.980 kb on + strand, within HP15_338 at 334.061 kb on + strand, within HP15_338 at 334.208 kb on + strand, within HP15_338 at 334.231 kb on - strand, within HP15_338 at 334.231 kb on - strand, within HP15_338 at 334.242 kb on + strand, within HP15_338 at 334.242 kb on + strand, within HP15_338 at 334.410 kb on - strand, within HP15_338 at 334.410 kb on - strand, within HP15_338 at 334.462 kb on - strand, within HP15_338
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 332,675 + HP15_336 0.51 -0.3 332,675 + HP15_336 0.51 -0.7 332,713 + HP15_336 0.53 +0.7 332,793 + HP15_336 0.58 -0.3 332,934 + HP15_336 0.67 -0.9 333,012 + HP15_336 0.72 -0.3 333,240 + HP15_336 0.86 -0.9 333,240 + HP15_336 0.86 -0.3 333,245 + HP15_336 0.87 -1.4 333,406 + -0.6 333,406 + -0.8 333,414 - -0.7 333,414 - -0.1 333,414 - -1.3 333,414 - -0.7 333,455 - -0.4 333,475 + -0.9 333,618 - HP15_337 0.42 +1.1 333,691 + +0.8 333,709 + -0.1 333,801 - +0.3 333,980 + HP15_338 0.14 -0.5 334,061 + HP15_338 0.17 +0.1 334,208 + HP15_338 0.24 -1.3 334,231 - HP15_338 0.25 +0.1 334,231 - HP15_338 0.25 +0.5 334,242 + HP15_338 0.26 +0.7 334,242 + HP15_338 0.26 +0.4 334,410 - HP15_338 0.33 -0.2 334,410 - HP15_338 0.33 -0.3 334,462 - HP15_338 0.35 +0.2
Or see this region's nucleotide sequence