Strain Fitness in Marinobacter adhaerens HP15 around HP15_3328

Experiment: L-Glutamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3326 and HP15_3327 are separated by 176 nucleotidesHP15_3327 and HP15_3328 are separated by 114 nucleotidesHP15_3328 and HP15_3329 are separated by 192 nucleotides HP15_3326: HP15_3326 - cytochrome c, class I, at 3,486,339 to 3,486,947 _3326 HP15_3327: HP15_3327 - GTP-binding protein EngB, at 3,487,124 to 3,487,771 _3327 HP15_3328: HP15_3328 - transcriptional regulator, TetR family, at 3,487,886 to 3,488,635 _3328 HP15_3329: HP15_3329 - NAD-dependent aldehyde dehydrogenase, at 3,488,828 to 3,490,273 _3329 Position (kb) 3487 3488 3489Strain fitness (log2 ratio) -1 0 1at 3486.992 kb on - strandat 3487.081 kb on - strandat 3487.815 kb on - strandat 3487.897 kb on - strandat 3487.906 kb on - strandat 3488.125 kb on - strand, within HP15_3328at 3488.134 kb on + strand, within HP15_3328at 3488.166 kb on + strand, within HP15_3328at 3488.308 kb on - strand, within HP15_3328at 3488.341 kb on - strand, within HP15_3328at 3488.391 kb on + strand, within HP15_3328at 3488.519 kb on - strand, within HP15_3328at 3488.578 kb on + strandat 3488.978 kb on - strand, within HP15_3329at 3489.114 kb on + strand, within HP15_3329at 3489.138 kb on + strand, within HP15_3329at 3489.148 kb on + strand, within HP15_3329at 3489.156 kb on - strand, within HP15_3329at 3489.181 kb on + strand, within HP15_3329at 3489.181 kb on + strand, within HP15_3329at 3489.189 kb on - strand, within HP15_3329at 3489.196 kb on - strand, within HP15_3329at 3489.307 kb on + strand, within HP15_3329at 3489.309 kb on + strand, within HP15_3329at 3489.309 kb on + strand, within HP15_3329at 3489.310 kb on - strand, within HP15_3329at 3489.317 kb on - strand, within HP15_3329at 3489.317 kb on - strand, within HP15_3329at 3489.405 kb on - strand, within HP15_3329at 3489.495 kb on + strand, within HP15_3329at 3489.495 kb on + strand, within HP15_3329at 3489.503 kb on - strand, within HP15_3329at 3489.516 kb on - strand, within HP15_3329at 3489.529 kb on - strand, within HP15_3329at 3489.593 kb on + strand, within HP15_3329at 3489.615 kb on + strand, within HP15_3329

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N)
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3,486,992 - -0.2
3,487,081 - +0.1
3,487,815 - +0.2
3,487,897 - +1.6
3,487,906 - +1.1
3,488,125 - HP15_3328 0.32 -0.7
3,488,134 + HP15_3328 0.33 +1.1
3,488,166 + HP15_3328 0.37 -0.0
3,488,308 - HP15_3328 0.56 +0.4
3,488,341 - HP15_3328 0.61 +0.7
3,488,391 + HP15_3328 0.67 +0.5
3,488,519 - HP15_3328 0.84 +0.4
3,488,578 + +0.0
3,488,978 - HP15_3329 0.10 -0.5
3,489,114 + HP15_3329 0.20 -0.3
3,489,138 + HP15_3329 0.21 -0.5
3,489,148 + HP15_3329 0.22 -0.3
3,489,156 - HP15_3329 0.23 -0.0
3,489,181 + HP15_3329 0.24 -0.2
3,489,181 + HP15_3329 0.24 -0.1
3,489,189 - HP15_3329 0.25 -0.1
3,489,196 - HP15_3329 0.25 +0.9
3,489,307 + HP15_3329 0.33 -0.2
3,489,309 + HP15_3329 0.33 +0.2
3,489,309 + HP15_3329 0.33 +0.2
3,489,310 - HP15_3329 0.33 -0.0
3,489,317 - HP15_3329 0.34 +0.0
3,489,317 - HP15_3329 0.34 -0.4
3,489,405 - HP15_3329 0.40 +0.3
3,489,495 + HP15_3329 0.46 -0.0
3,489,495 + HP15_3329 0.46 -1.2
3,489,503 - HP15_3329 0.47 +1.2
3,489,516 - HP15_3329 0.48 +0.6
3,489,529 - HP15_3329 0.48 -0.5
3,489,593 + HP15_3329 0.53 -0.5
3,489,615 + HP15_3329 0.54 -0.5

Or see this region's nucleotide sequence