Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3107 and HP15_3108 are separated by 801 nucleotides HP15_3108 and HP15_3109 are separated by 938 nucleotides
HP15_3107: HP15_3107 - hypothetical protein, at 3,257,850 to 3,257,981
_3107
HP15_3108: HP15_3108 - hypothetical protein, at 3,258,783 to 3,259,013
_3108
HP15_3109: HP15_3109 - hypothetical protein, at 3,259,952 to 3,260,743
_3109
Position (kb)
3258
3259
3260 Strain fitness (log2 ratio)
-1
0
1 at 3257.812 kb on - strand at 3257.936 kb on + strand, within HP15_3107 at 3258.111 kb on - strand at 3258.135 kb on + strand at 3258.135 kb on + strand at 3258.143 kb on - strand at 3258.259 kb on - strand at 3258.323 kb on - strand at 3258.392 kb on - strand at 3258.425 kb on + strand at 3258.462 kb on - strand at 3258.602 kb on + strand at 3258.612 kb on - strand at 3258.787 kb on + strand at 3258.860 kb on + strand, within HP15_3108 at 3259.066 kb on + strand at 3259.066 kb on + strand at 3259.066 kb on + strand at 3259.066 kb on + strand at 3259.074 kb on - strand at 3259.074 kb on - strand at 3259.074 kb on - strand at 3259.130 kb on + strand at 3259.130 kb on + strand at 3259.189 kb on - strand at 3259.213 kb on + strand at 3259.221 kb on - strand at 3259.290 kb on + strand at 3259.383 kb on + strand at 3259.393 kb on - strand at 3259.427 kb on - strand at 3259.461 kb on - strand at 3259.491 kb on - strand at 3259.544 kb on - strand at 3259.616 kb on + strand at 3259.616 kb on - strand at 3259.648 kb on - strand at 3259.689 kb on + strand at 3259.699 kb on + strand at 3259.699 kb on + strand at 3259.763 kb on - strand at 3259.777 kb on + strand at 3259.787 kb on + strand at 3259.787 kb on + strand at 3259.787 kb on + strand at 3259.787 kb on + strand at 3259.795 kb on - strand at 3259.795 kb on - strand at 3259.795 kb on - strand at 3259.936 kb on + strand at 3259.972 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 3,257,812 - -0.8 3,257,936 + HP15_3107 0.65 -0.7 3,258,111 - +0.7 3,258,135 + +0.4 3,258,135 + -0.1 3,258,143 - -0.1 3,258,259 - +0.2 3,258,323 - +0.2 3,258,392 - +0.0 3,258,425 + +0.7 3,258,462 - -1.7 3,258,602 + -0.2 3,258,612 - +0.4 3,258,787 + +0.3 3,258,860 + HP15_3108 0.33 +1.1 3,259,066 + +0.1 3,259,066 + -0.7 3,259,066 + +0.3 3,259,066 + -0.1 3,259,074 - +1.3 3,259,074 - +0.3 3,259,074 - -0.1 3,259,130 + +0.1 3,259,130 + +0.0 3,259,189 - +0.4 3,259,213 + +0.7 3,259,221 - +0.1 3,259,290 + +0.3 3,259,383 + -0.1 3,259,393 - -1.3 3,259,427 - -0.3 3,259,461 - +0.2 3,259,491 - -0.9 3,259,544 - -0.9 3,259,616 + -0.1 3,259,616 - +0.2 3,259,648 - +0.3 3,259,689 + -0.7 3,259,699 + +0.7 3,259,699 + -0.1 3,259,763 - -0.2 3,259,777 + +0.1 3,259,787 + +0.5 3,259,787 + -0.0 3,259,787 + -0.6 3,259,787 + +0.1 3,259,795 - +0.3 3,259,795 - +0.3 3,259,795 - +0.7 3,259,936 + -0.3 3,259,972 - +0.5
Or see this region's nucleotide sequence