Strain Fitness in Marinobacter adhaerens HP15 around HP15_2973

Experiment: L-Glutamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2971 and HP15_2972 are separated by 215 nucleotidesHP15_2972 and HP15_2973 are separated by 98 nucleotidesHP15_2973 and HP15_2974 are separated by 166 nucleotidesHP15_2974 and HP15_2975 are separated by 59 nucleotides HP15_2971: HP15_2971 - auxin efflux carrier, at 3,115,237 to 3,116,154 _2971 HP15_2972: HP15_2972 - cyclic nucleotide-binding protein, at 3,116,370 to 3,117,029 _2972 HP15_2973: HP15_2973 - flavoprotein wrbA, at 3,117,128 to 3,117,727 _2973 HP15_2974: HP15_2974 - channel protein, hemolysin III family, at 3,117,894 to 3,118,595 _2974 HP15_2975: HP15_2975 - protein belonging to uncharacterized protein family UPF0310, at 3,118,655 to 3,119,113 _2975 Position (kb) 3117 3118Strain fitness (log2 ratio) -1 0 1 2at 3116.160 kb on - strandat 3116.173 kb on + strandat 3116.291 kb on + strandat 3116.352 kb on - strandat 3116.403 kb on - strandat 3116.578 kb on + strand, within HP15_2972at 3116.802 kb on + strand, within HP15_2972at 3116.936 kb on + strand, within HP15_2972at 3116.977 kb on + strandat 3117.022 kb on + strandat 3117.042 kb on + strandat 3117.265 kb on + strand, within HP15_2973at 3117.489 kb on + strand, within HP15_2973at 3117.537 kb on + strand, within HP15_2973at 3117.654 kb on - strand, within HP15_2973at 3117.668 kb on - strandat 3117.728 kb on + strandat 3117.775 kb on + strandat 3117.858 kb on + strandat 3117.947 kb on - strandat 3118.061 kb on + strand, within HP15_2974at 3118.069 kb on - strand, within HP15_2974at 3118.112 kb on + strand, within HP15_2974at 3118.120 kb on - strand, within HP15_2974at 3118.135 kb on - strand, within HP15_2974at 3118.139 kb on + strand, within HP15_2974at 3118.169 kb on - strand, within HP15_2974at 3118.319 kb on - strand, within HP15_2974at 3118.458 kb on + strand, within HP15_2974at 3118.500 kb on + strand, within HP15_2974at 3118.500 kb on + strand, within HP15_2974at 3118.500 kb on + strand, within HP15_2974at 3118.500 kb on + strand, within HP15_2974at 3118.500 kb on + strand, within HP15_2974at 3118.500 kb on + strand, within HP15_2974at 3118.501 kb on - strand, within HP15_2974at 3118.508 kb on - strand, within HP15_2974at 3118.508 kb on - strand, within HP15_2974at 3118.565 kb on + strandat 3118.565 kb on + strandat 3118.621 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N)
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3,116,160 - -1.0
3,116,173 + -0.5
3,116,291 + +0.0
3,116,352 - -0.2
3,116,403 - -0.5
3,116,578 + HP15_2972 0.32 +0.4
3,116,802 + HP15_2972 0.65 +0.9
3,116,936 + HP15_2972 0.86 +0.5
3,116,977 + +0.0
3,117,022 + -0.4
3,117,042 + +2.0
3,117,265 + HP15_2973 0.23 +0.9
3,117,489 + HP15_2973 0.60 +0.5
3,117,537 + HP15_2973 0.68 +0.8
3,117,654 - HP15_2973 0.88 +1.3
3,117,668 - +0.1
3,117,728 + +0.4
3,117,775 + +0.1
3,117,858 + +0.2
3,117,947 - +0.5
3,118,061 + HP15_2974 0.24 -0.1
3,118,069 - HP15_2974 0.25 -0.5
3,118,112 + HP15_2974 0.31 -0.5
3,118,120 - HP15_2974 0.32 +0.2
3,118,135 - HP15_2974 0.34 -0.2
3,118,139 + HP15_2974 0.35 +0.5
3,118,169 - HP15_2974 0.39 +0.1
3,118,319 - HP15_2974 0.61 -0.3
3,118,458 + HP15_2974 0.80 +0.4
3,118,500 + HP15_2974 0.86 +0.0
3,118,500 + HP15_2974 0.86 +0.4
3,118,500 + HP15_2974 0.86 +0.7
3,118,500 + HP15_2974 0.86 -0.2
3,118,500 + HP15_2974 0.86 +0.7
3,118,500 + HP15_2974 0.86 +1.1
3,118,501 - HP15_2974 0.86 +0.3
3,118,508 - HP15_2974 0.87 +0.0
3,118,508 - HP15_2974 0.87 +0.6
3,118,565 + -0.1
3,118,565 + -0.4
3,118,621 + -0.1

Or see this region's nucleotide sequence