Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2796 and HP15_2797 are separated by 90 nucleotides HP15_2797 and HP15_2798 are separated by 66 nucleotides HP15_2798 and HP15_2799 are separated by 9 nucleotides HP15_2799 and HP15_2800 are separated by 183 nucleotides
HP15_2796: HP15_2796 - serine protease, at 2,944,299 to 2,945,192
_2796
HP15_2797: HP15_2797 - glutathione S-transferase family protein, at 2,945,283 to 2,945,951
_2797
HP15_2798: HP15_2798 - protein containing cupin 2, conserved barrel domain, at 2,946,018 to 2,946,395
_2798
HP15_2799: HP15_2799 - hydrolase, alpha/beta fold family, at 2,946,405 to 2,947,193
_2799
HP15_2800: HP15_2800 - glucose-methanol-choline oxidoreductase, at 2,947,377 to 2,948,990
_2800
Position (kb)
2946
2947 Strain fitness (log2 ratio)
-1
0
1 at 2945.099 kb on + strand, within HP15_2796 at 2945.133 kb on - strand at 2945.160 kb on + strand at 2945.204 kb on - strand at 2945.242 kb on + strand at 2945.250 kb on - strand at 2945.306 kb on - strand at 2945.552 kb on - strand, within HP15_2797 at 2945.552 kb on - strand, within HP15_2797 at 2945.597 kb on + strand, within HP15_2797 at 2945.633 kb on + strand, within HP15_2797 at 2945.675 kb on - strand, within HP15_2797 at 2945.738 kb on - strand, within HP15_2797 at 2945.842 kb on - strand, within HP15_2797 at 2945.875 kb on - strand, within HP15_2797 at 2945.904 kb on + strand at 2945.912 kb on - strand at 2945.928 kb on + strand at 2945.972 kb on + strand at 2946.176 kb on - strand, within HP15_2798 at 2946.285 kb on + strand, within HP15_2798 at 2946.310 kb on - strand, within HP15_2798 at 2946.332 kb on - strand, within HP15_2798 at 2946.411 kb on - strand at 2946.411 kb on - strand at 2946.461 kb on + strand at 2946.520 kb on + strand, within HP15_2799 at 2946.520 kb on + strand, within HP15_2799 at 2946.528 kb on - strand, within HP15_2799 at 2946.705 kb on - strand, within HP15_2799 at 2946.744 kb on - strand, within HP15_2799 at 2946.746 kb on + strand, within HP15_2799 at 2946.756 kb on - strand, within HP15_2799 at 2946.870 kb on + strand, within HP15_2799 at 2946.878 kb on - strand, within HP15_2799 at 2946.878 kb on - strand, within HP15_2799 at 2946.878 kb on - strand, within HP15_2799 at 2946.898 kb on - strand, within HP15_2799 at 2947.031 kb on + strand, within HP15_2799 at 2947.037 kb on + strand at 2947.127 kb on - strand at 2947.127 kb on - strand at 2947.161 kb on - strand at 2947.225 kb on + strand at 2947.239 kb on + strand at 2947.284 kb on - strand at 2947.294 kb on - strand at 2947.301 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 2,945,099 + HP15_2796 0.89 +0.1 2,945,133 - +0.1 2,945,160 + +0.6 2,945,204 - +1.5 2,945,242 + +0.4 2,945,250 - +0.7 2,945,306 - +1.4 2,945,552 - HP15_2797 0.40 +0.2 2,945,552 - HP15_2797 0.40 +0.7 2,945,597 + HP15_2797 0.47 -0.2 2,945,633 + HP15_2797 0.52 -0.1 2,945,675 - HP15_2797 0.59 +0.0 2,945,738 - HP15_2797 0.68 +0.0 2,945,842 - HP15_2797 0.84 +0.7 2,945,875 - HP15_2797 0.88 -0.3 2,945,904 + +0.1 2,945,912 - -0.1 2,945,928 + -0.9 2,945,972 + -0.2 2,946,176 - HP15_2798 0.42 +0.8 2,946,285 + HP15_2798 0.71 +0.1 2,946,310 - HP15_2798 0.77 +0.7 2,946,332 - HP15_2798 0.83 +0.5 2,946,411 - +0.1 2,946,411 - -0.8 2,946,461 + -0.7 2,946,520 + HP15_2799 0.15 -1.3 2,946,520 + HP15_2799 0.15 +0.2 2,946,528 - HP15_2799 0.16 +1.2 2,946,705 - HP15_2799 0.38 +0.3 2,946,744 - HP15_2799 0.43 +0.2 2,946,746 + HP15_2799 0.43 -0.0 2,946,756 - HP15_2799 0.44 +0.1 2,946,870 + HP15_2799 0.59 +0.2 2,946,878 - HP15_2799 0.60 -0.0 2,946,878 - HP15_2799 0.60 -0.3 2,946,878 - HP15_2799 0.60 -0.9 2,946,898 - HP15_2799 0.62 +0.2 2,947,031 + HP15_2799 0.79 +0.3 2,947,037 + -0.3 2,947,127 - +0.9 2,947,127 - -0.5 2,947,161 - -0.5 2,947,225 + -0.2 2,947,239 + +0.5 2,947,284 - +0.5 2,947,294 - -0.1 2,947,301 - +1.1
Or see this region's nucleotide sequence