Strain Fitness in Marinobacter adhaerens HP15 around HP15_2371

Experiment: L-Glutamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2369 and HP15_2370 are separated by 247 nucleotidesHP15_2370 and HP15_2371 are separated by 70 nucleotidesHP15_2371 and HP15_2372 are separated by 387 nucleotides HP15_2369: HP15_2369 - flagellar hook-associated 2 domain protein, at 2,494,197 to 2,496,185 _2369 HP15_2370: HP15_2370 - flagellar protein FlaG protein, at 2,496,433 to 2,496,867 _2370 HP15_2371: HP15_2371 - flagellin FliC, at 2,496,938 to 2,498,782 _2371 HP15_2372: HP15_2372 - protein containing flagellin N-terminal / flagellin C-terminal, at 2,499,170 to 2,500,996 _2372 Position (kb) 2496 2497 2498 2499Strain fitness (log2 ratio) -1 0 1 2 3at 2495.968 kb on + strand, within HP15_2369at 2495.976 kb on - strand, within HP15_2369at 2495.994 kb on - strandat 2496.028 kb on + strandat 2496.036 kb on - strandat 2496.076 kb on - strandat 2496.141 kb on + strandat 2496.190 kb on - strandat 2496.190 kb on - strandat 2496.429 kb on - strandat 2496.431 kb on + strandat 2496.439 kb on - strandat 2496.689 kb on + strand, within HP15_2370at 2496.697 kb on - strand, within HP15_2370at 2496.697 kb on - strand, within HP15_2370at 2496.699 kb on + strand, within HP15_2370at 2496.707 kb on - strand, within HP15_2370at 2496.767 kb on + strand, within HP15_2370at 2496.837 kb on + strandat 2496.845 kb on - strandat 2496.847 kb on + strandat 2496.852 kb on + strandat 2496.852 kb on + strandat 2496.883 kb on + strandat 2496.891 kb on - strandat 2496.915 kb on + strandat 2496.921 kb on - strandat 2496.941 kb on + strandat 2496.949 kb on - strandat 2497.020 kb on + strandat 2497.093 kb on + strandat 2497.096 kb on - strandat 2497.106 kb on - strandat 2497.133 kb on + strand, within HP15_2371at 2497.141 kb on - strand, within HP15_2371at 2497.141 kb on - strand, within HP15_2371at 2497.178 kb on - strand, within HP15_2371at 2497.247 kb on - strand, within HP15_2371at 2497.331 kb on - strand, within HP15_2371at 2497.433 kb on - strand, within HP15_2371at 2497.566 kb on + strand, within HP15_2371at 2497.642 kb on + strand, within HP15_2371at 2497.650 kb on - strand, within HP15_2371at 2497.696 kb on - strand, within HP15_2371at 2497.730 kb on + strand, within HP15_2371at 2497.795 kb on + strand, within HP15_2371at 2497.825 kb on + strand, within HP15_2371at 2497.912 kb on - strand, within HP15_2371at 2497.930 kb on + strand, within HP15_2371at 2497.938 kb on - strand, within HP15_2371at 2498.000 kb on - strand, within HP15_2371at 2498.037 kb on + strand, within HP15_2371at 2498.112 kb on + strand, within HP15_2371at 2498.131 kb on + strand, within HP15_2371at 2498.131 kb on + strand, within HP15_2371at 2498.284 kb on - strand, within HP15_2371at 2498.310 kb on + strand, within HP15_2371at 2498.336 kb on + strand, within HP15_2371at 2498.434 kb on - strand, within HP15_2371at 2498.487 kb on - strand, within HP15_2371at 2498.557 kb on + strand, within HP15_2371at 2498.597 kb on + strand, within HP15_2371at 2498.616 kb on + strandat 2499.148 kb on + strandat 2499.148 kb on + strandat 2499.148 kb on + strandat 2499.148 kb on + strandat 2499.148 kb on + strandat 2499.156 kb on - strandat 2499.156 kb on - strandat 2499.156 kb on - strandat 2499.156 kb on - strandat 2499.228 kb on - strandat 2499.283 kb on - strandat 2499.399 kb on - strand, within HP15_2372at 2499.409 kb on - strand, within HP15_2372at 2499.513 kb on - strand, within HP15_2372at 2499.651 kb on + strand, within HP15_2372at 2499.659 kb on - strand, within HP15_2372at 2499.704 kb on - strand, within HP15_2372at 2499.717 kb on + strand, within HP15_2372at 2499.761 kb on + strand, within HP15_2372

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N)
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2,495,968 + HP15_2369 0.89 +0.4
2,495,976 - HP15_2369 0.89 +0.7
2,495,994 - +0.3
2,496,028 + +0.3
2,496,036 - -0.7
2,496,076 - +0.3
2,496,141 + +0.3
2,496,190 - +0.3
2,496,190 - -0.3
2,496,429 - -1.0
2,496,431 + -0.2
2,496,439 - +0.5
2,496,689 + HP15_2370 0.59 +0.1
2,496,697 - HP15_2370 0.61 +0.9
2,496,697 - HP15_2370 0.61 -0.8
2,496,699 + HP15_2370 0.61 -0.2
2,496,707 - HP15_2370 0.63 +0.4
2,496,767 + HP15_2370 0.77 +0.3
2,496,837 + +0.4
2,496,845 - +0.7
2,496,847 + +0.8
2,496,852 + -1.7
2,496,852 + +0.8
2,496,883 + +0.4
2,496,891 - -0.3
2,496,915 + +1.4
2,496,921 - -0.2
2,496,941 + +0.2
2,496,949 - +0.3
2,497,020 + -0.4
2,497,093 + +0.1
2,497,096 - -0.0
2,497,106 - +0.3
2,497,133 + HP15_2371 0.11 +0.8
2,497,141 - HP15_2371 0.11 +0.7
2,497,141 - HP15_2371 0.11 +0.9
2,497,178 - HP15_2371 0.13 +0.3
2,497,247 - HP15_2371 0.17 +0.3
2,497,331 - HP15_2371 0.21 +0.5
2,497,433 - HP15_2371 0.27 +0.6
2,497,566 + HP15_2371 0.34 -0.4
2,497,642 + HP15_2371 0.38 +0.3
2,497,650 - HP15_2371 0.39 +3.5
2,497,696 - HP15_2371 0.41 -0.3
2,497,730 + HP15_2371 0.43 -1.3
2,497,795 + HP15_2371 0.46 +0.3
2,497,825 + HP15_2371 0.48 +0.6
2,497,912 - HP15_2371 0.53 -0.9
2,497,930 + HP15_2371 0.54 +0.1
2,497,938 - HP15_2371 0.54 +1.2
2,498,000 - HP15_2371 0.58 +0.6
2,498,037 + HP15_2371 0.60 -0.0
2,498,112 + HP15_2371 0.64 +1.1
2,498,131 + HP15_2371 0.65 -1.4
2,498,131 + HP15_2371 0.65 -1.2
2,498,284 - HP15_2371 0.73 -0.4
2,498,310 + HP15_2371 0.74 +0.6
2,498,336 + HP15_2371 0.76 +0.1
2,498,434 - HP15_2371 0.81 +1.3
2,498,487 - HP15_2371 0.84 -0.4
2,498,557 + HP15_2371 0.88 -0.2
2,498,597 + HP15_2371 0.90 -0.2
2,498,616 + -0.4
2,499,148 + -0.1
2,499,148 + -0.3
2,499,148 + +0.4
2,499,148 + -0.8
2,499,148 + -0.1
2,499,156 - -0.1
2,499,156 - -1.4
2,499,156 - -0.2
2,499,156 - +0.8
2,499,228 - -0.2
2,499,283 - +0.4
2,499,399 - HP15_2372 0.13 -0.5
2,499,409 - HP15_2372 0.13 +0.1
2,499,513 - HP15_2372 0.19 +0.1
2,499,651 + HP15_2372 0.26 +0.9
2,499,659 - HP15_2372 0.27 +0.5
2,499,704 - HP15_2372 0.29 +0.1
2,499,717 + HP15_2372 0.30 -0.1
2,499,761 + HP15_2372 0.32 +0.7

Or see this region's nucleotide sequence