Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2369 and HP15_2370 are separated by 247 nucleotides HP15_2370 and HP15_2371 are separated by 70 nucleotides HP15_2371 and HP15_2372 are separated by 387 nucleotides
HP15_2369: HP15_2369 - flagellar hook-associated 2 domain protein, at 2,494,197 to 2,496,185
_2369
HP15_2370: HP15_2370 - flagellar protein FlaG protein, at 2,496,433 to 2,496,867
_2370
HP15_2371: HP15_2371 - flagellin FliC, at 2,496,938 to 2,498,782
_2371
HP15_2372: HP15_2372 - protein containing flagellin N-terminal / flagellin C-terminal, at 2,499,170 to 2,500,996
_2372
Position (kb)
2496
2497
2498
2499 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2495.968 kb on + strand, within HP15_2369 at 2495.976 kb on - strand, within HP15_2369 at 2495.994 kb on - strand at 2496.028 kb on + strand at 2496.036 kb on - strand at 2496.076 kb on - strand at 2496.141 kb on + strand at 2496.190 kb on - strand at 2496.190 kb on - strand at 2496.429 kb on - strand at 2496.431 kb on + strand at 2496.439 kb on - strand at 2496.689 kb on + strand, within HP15_2370 at 2496.697 kb on - strand, within HP15_2370 at 2496.697 kb on - strand, within HP15_2370 at 2496.699 kb on + strand, within HP15_2370 at 2496.707 kb on - strand, within HP15_2370 at 2496.767 kb on + strand, within HP15_2370 at 2496.837 kb on + strand at 2496.845 kb on - strand at 2496.847 kb on + strand at 2496.852 kb on + strand at 2496.852 kb on + strand at 2496.883 kb on + strand at 2496.891 kb on - strand at 2496.915 kb on + strand at 2496.921 kb on - strand at 2496.941 kb on + strand at 2496.949 kb on - strand at 2497.020 kb on + strand at 2497.093 kb on + strand at 2497.096 kb on - strand at 2497.106 kb on - strand at 2497.133 kb on + strand, within HP15_2371 at 2497.141 kb on - strand, within HP15_2371 at 2497.141 kb on - strand, within HP15_2371 at 2497.178 kb on - strand, within HP15_2371 at 2497.247 kb on - strand, within HP15_2371 at 2497.331 kb on - strand, within HP15_2371 at 2497.433 kb on - strand, within HP15_2371 at 2497.566 kb on + strand, within HP15_2371 at 2497.642 kb on + strand, within HP15_2371 at 2497.650 kb on - strand, within HP15_2371 at 2497.696 kb on - strand, within HP15_2371 at 2497.730 kb on + strand, within HP15_2371 at 2497.795 kb on + strand, within HP15_2371 at 2497.825 kb on + strand, within HP15_2371 at 2497.912 kb on - strand, within HP15_2371 at 2497.930 kb on + strand, within HP15_2371 at 2497.938 kb on - strand, within HP15_2371 at 2498.000 kb on - strand, within HP15_2371 at 2498.037 kb on + strand, within HP15_2371 at 2498.112 kb on + strand, within HP15_2371 at 2498.131 kb on + strand, within HP15_2371 at 2498.131 kb on + strand, within HP15_2371 at 2498.284 kb on - strand, within HP15_2371 at 2498.310 kb on + strand, within HP15_2371 at 2498.336 kb on + strand, within HP15_2371 at 2498.434 kb on - strand, within HP15_2371 at 2498.487 kb on - strand, within HP15_2371 at 2498.557 kb on + strand, within HP15_2371 at 2498.597 kb on + strand, within HP15_2371 at 2498.616 kb on + strand at 2499.148 kb on + strand at 2499.148 kb on + strand at 2499.148 kb on + strand at 2499.148 kb on + strand at 2499.148 kb on + strand at 2499.156 kb on - strand at 2499.156 kb on - strand at 2499.156 kb on - strand at 2499.156 kb on - strand at 2499.228 kb on - strand at 2499.283 kb on - strand at 2499.399 kb on - strand, within HP15_2372 at 2499.409 kb on - strand, within HP15_2372 at 2499.513 kb on - strand, within HP15_2372 at 2499.651 kb on + strand, within HP15_2372 at 2499.659 kb on - strand, within HP15_2372 at 2499.704 kb on - strand, within HP15_2372 at 2499.717 kb on + strand, within HP15_2372 at 2499.761 kb on + strand, within HP15_2372
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 2,495,968 + HP15_2369 0.89 +0.4 2,495,976 - HP15_2369 0.89 +0.7 2,495,994 - +0.3 2,496,028 + +0.3 2,496,036 - -0.7 2,496,076 - +0.3 2,496,141 + +0.3 2,496,190 - +0.3 2,496,190 - -0.3 2,496,429 - -1.0 2,496,431 + -0.2 2,496,439 - +0.5 2,496,689 + HP15_2370 0.59 +0.1 2,496,697 - HP15_2370 0.61 +0.9 2,496,697 - HP15_2370 0.61 -0.8 2,496,699 + HP15_2370 0.61 -0.2 2,496,707 - HP15_2370 0.63 +0.4 2,496,767 + HP15_2370 0.77 +0.3 2,496,837 + +0.4 2,496,845 - +0.7 2,496,847 + +0.8 2,496,852 + -1.7 2,496,852 + +0.8 2,496,883 + +0.4 2,496,891 - -0.3 2,496,915 + +1.4 2,496,921 - -0.2 2,496,941 + +0.2 2,496,949 - +0.3 2,497,020 + -0.4 2,497,093 + +0.1 2,497,096 - -0.0 2,497,106 - +0.3 2,497,133 + HP15_2371 0.11 +0.8 2,497,141 - HP15_2371 0.11 +0.7 2,497,141 - HP15_2371 0.11 +0.9 2,497,178 - HP15_2371 0.13 +0.3 2,497,247 - HP15_2371 0.17 +0.3 2,497,331 - HP15_2371 0.21 +0.5 2,497,433 - HP15_2371 0.27 +0.6 2,497,566 + HP15_2371 0.34 -0.4 2,497,642 + HP15_2371 0.38 +0.3 2,497,650 - HP15_2371 0.39 +3.5 2,497,696 - HP15_2371 0.41 -0.3 2,497,730 + HP15_2371 0.43 -1.3 2,497,795 + HP15_2371 0.46 +0.3 2,497,825 + HP15_2371 0.48 +0.6 2,497,912 - HP15_2371 0.53 -0.9 2,497,930 + HP15_2371 0.54 +0.1 2,497,938 - HP15_2371 0.54 +1.2 2,498,000 - HP15_2371 0.58 +0.6 2,498,037 + HP15_2371 0.60 -0.0 2,498,112 + HP15_2371 0.64 +1.1 2,498,131 + HP15_2371 0.65 -1.4 2,498,131 + HP15_2371 0.65 -1.2 2,498,284 - HP15_2371 0.73 -0.4 2,498,310 + HP15_2371 0.74 +0.6 2,498,336 + HP15_2371 0.76 +0.1 2,498,434 - HP15_2371 0.81 +1.3 2,498,487 - HP15_2371 0.84 -0.4 2,498,557 + HP15_2371 0.88 -0.2 2,498,597 + HP15_2371 0.90 -0.2 2,498,616 + -0.4 2,499,148 + -0.1 2,499,148 + -0.3 2,499,148 + +0.4 2,499,148 + -0.8 2,499,148 + -0.1 2,499,156 - -0.1 2,499,156 - -1.4 2,499,156 - -0.2 2,499,156 - +0.8 2,499,228 - -0.2 2,499,283 - +0.4 2,499,399 - HP15_2372 0.13 -0.5 2,499,409 - HP15_2372 0.13 +0.1 2,499,513 - HP15_2372 0.19 +0.1 2,499,651 + HP15_2372 0.26 +0.9 2,499,659 - HP15_2372 0.27 +0.5 2,499,704 - HP15_2372 0.29 +0.1 2,499,717 + HP15_2372 0.30 -0.1 2,499,761 + HP15_2372 0.32 +0.7
Or see this region's nucleotide sequence