Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2367 and HP15_2368 are separated by 150 nucleotides HP15_2368 and HP15_2369 are separated by 36 nucleotides
HP15_2367: HP15_2367 - argininosuccinate synthase, at 2,492,385 to 2,493,611
_2367
HP15_2368: HP15_2368 - flagellar protein FliS, at 2,493,762 to 2,494,160
_2368
HP15_2369: HP15_2369 - flagellar hook-associated 2 domain protein, at 2,494,197 to 2,496,185
_2369
Position (kb)
2493
2494
2495 Strain fitness (log2 ratio)
-1
0
1 at 2493.600 kb on - strand at 2493.693 kb on - strand at 2493.726 kb on + strand at 2493.726 kb on + strand at 2493.831 kb on - strand, within HP15_2368 at 2493.835 kb on + strand, within HP15_2368 at 2493.934 kb on + strand, within HP15_2368 at 2494.029 kb on - strand, within HP15_2368 at 2494.041 kb on - strand, within HP15_2368 at 2494.069 kb on + strand, within HP15_2368 at 2494.080 kb on - strand, within HP15_2368 at 2494.146 kb on - strand at 2494.153 kb on - strand at 2494.212 kb on + strand at 2494.254 kb on - strand at 2494.259 kb on - strand at 2494.379 kb on + strand at 2494.615 kb on - strand, within HP15_2369 at 2494.713 kb on - strand, within HP15_2369 at 2494.806 kb on + strand, within HP15_2369 at 2494.820 kb on - strand, within HP15_2369 at 2494.831 kb on - strand, within HP15_2369 at 2494.952 kb on + strand, within HP15_2369 at 2494.955 kb on - strand, within HP15_2369 at 2494.999 kb on - strand, within HP15_2369 at 2495.017 kb on + strand, within HP15_2369 at 2495.083 kb on + strand, within HP15_2369 at 2495.083 kb on + strand, within HP15_2369 at 2495.083 kb on + strand, within HP15_2369 at 2495.091 kb on - strand, within HP15_2369 at 2495.091 kb on - strand, within HP15_2369 at 2495.091 kb on - strand, within HP15_2369 at 2495.091 kb on - strand, within HP15_2369 at 2495.096 kb on + strand, within HP15_2369 at 2495.139 kb on - strand, within HP15_2369
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 2,493,600 - +0.6 2,493,693 - +0.5 2,493,726 + -0.4 2,493,726 + +0.7 2,493,831 - HP15_2368 0.17 -0.1 2,493,835 + HP15_2368 0.18 +1.2 2,493,934 + HP15_2368 0.43 +1.2 2,494,029 - HP15_2368 0.67 +0.4 2,494,041 - HP15_2368 0.70 +0.6 2,494,069 + HP15_2368 0.77 +0.1 2,494,080 - HP15_2368 0.80 +0.1 2,494,146 - +0.2 2,494,153 - +0.2 2,494,212 + -1.4 2,494,254 - +0.3 2,494,259 - +0.9 2,494,379 + +0.3 2,494,615 - HP15_2369 0.21 +0.0 2,494,713 - HP15_2369 0.26 -0.2 2,494,806 + HP15_2369 0.31 +1.2 2,494,820 - HP15_2369 0.31 -0.2 2,494,831 - HP15_2369 0.32 +1.0 2,494,952 + HP15_2369 0.38 +1.2 2,494,955 - HP15_2369 0.38 +1.6 2,494,999 - HP15_2369 0.40 +0.7 2,495,017 + HP15_2369 0.41 +0.2 2,495,083 + HP15_2369 0.45 +0.9 2,495,083 + HP15_2369 0.45 +0.6 2,495,083 + HP15_2369 0.45 -0.2 2,495,091 - HP15_2369 0.45 -0.4 2,495,091 - HP15_2369 0.45 +0.6 2,495,091 - HP15_2369 0.45 +0.7 2,495,091 - HP15_2369 0.45 -0.1 2,495,096 + HP15_2369 0.45 -0.1 2,495,139 - HP15_2369 0.47 +1.1
Or see this region's nucleotide sequence