Strain Fitness in Marinobacter adhaerens HP15 around HP15_2368

Experiment: L-Glutamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2367 and HP15_2368 are separated by 150 nucleotidesHP15_2368 and HP15_2369 are separated by 36 nucleotides HP15_2367: HP15_2367 - argininosuccinate synthase, at 2,492,385 to 2,493,611 _2367 HP15_2368: HP15_2368 - flagellar protein FliS, at 2,493,762 to 2,494,160 _2368 HP15_2369: HP15_2369 - flagellar hook-associated 2 domain protein, at 2,494,197 to 2,496,185 _2369 Position (kb) 2493 2494 2495Strain fitness (log2 ratio) -1 0 1at 2493.600 kb on - strandat 2493.693 kb on - strandat 2493.726 kb on + strandat 2493.726 kb on + strandat 2493.831 kb on - strand, within HP15_2368at 2493.835 kb on + strand, within HP15_2368at 2493.934 kb on + strand, within HP15_2368at 2494.029 kb on - strand, within HP15_2368at 2494.041 kb on - strand, within HP15_2368at 2494.069 kb on + strand, within HP15_2368at 2494.080 kb on - strand, within HP15_2368at 2494.146 kb on - strandat 2494.153 kb on - strandat 2494.212 kb on + strandat 2494.254 kb on - strandat 2494.259 kb on - strandat 2494.379 kb on + strandat 2494.615 kb on - strand, within HP15_2369at 2494.713 kb on - strand, within HP15_2369at 2494.806 kb on + strand, within HP15_2369at 2494.820 kb on - strand, within HP15_2369at 2494.831 kb on - strand, within HP15_2369at 2494.952 kb on + strand, within HP15_2369at 2494.955 kb on - strand, within HP15_2369at 2494.999 kb on - strand, within HP15_2369at 2495.017 kb on + strand, within HP15_2369at 2495.083 kb on + strand, within HP15_2369at 2495.083 kb on + strand, within HP15_2369at 2495.083 kb on + strand, within HP15_2369at 2495.091 kb on - strand, within HP15_2369at 2495.091 kb on - strand, within HP15_2369at 2495.091 kb on - strand, within HP15_2369at 2495.091 kb on - strand, within HP15_2369at 2495.096 kb on + strand, within HP15_2369at 2495.139 kb on - strand, within HP15_2369

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N)
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2,493,600 - +0.6
2,493,693 - +0.5
2,493,726 + -0.4
2,493,726 + +0.7
2,493,831 - HP15_2368 0.17 -0.1
2,493,835 + HP15_2368 0.18 +1.2
2,493,934 + HP15_2368 0.43 +1.2
2,494,029 - HP15_2368 0.67 +0.4
2,494,041 - HP15_2368 0.70 +0.6
2,494,069 + HP15_2368 0.77 +0.1
2,494,080 - HP15_2368 0.80 +0.1
2,494,146 - +0.2
2,494,153 - +0.2
2,494,212 + -1.4
2,494,254 - +0.3
2,494,259 - +0.9
2,494,379 + +0.3
2,494,615 - HP15_2369 0.21 +0.0
2,494,713 - HP15_2369 0.26 -0.2
2,494,806 + HP15_2369 0.31 +1.2
2,494,820 - HP15_2369 0.31 -0.2
2,494,831 - HP15_2369 0.32 +1.0
2,494,952 + HP15_2369 0.38 +1.2
2,494,955 - HP15_2369 0.38 +1.6
2,494,999 - HP15_2369 0.40 +0.7
2,495,017 + HP15_2369 0.41 +0.2
2,495,083 + HP15_2369 0.45 +0.9
2,495,083 + HP15_2369 0.45 +0.6
2,495,083 + HP15_2369 0.45 -0.2
2,495,091 - HP15_2369 0.45 -0.4
2,495,091 - HP15_2369 0.45 +0.6
2,495,091 - HP15_2369 0.45 +0.7
2,495,091 - HP15_2369 0.45 -0.1
2,495,096 + HP15_2369 0.45 -0.1
2,495,139 - HP15_2369 0.47 +1.1

Or see this region's nucleotide sequence