Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2320 and HP15_2321 are separated by 24 nucleotides HP15_2321 and HP15_2322 are separated by 122 nucleotides HP15_2322 and HP15_2323 overlap by 1 nucleotides
HP15_2320: HP15_2320 - response regulator receiver protein, at 2,438,918 to 2,440,675
_2320
HP15_2321: HP15_2321 - anti-sigma-factor antagonist, at 2,440,700 to 2,441,005
_2321
HP15_2322: HP15_2322 - flagellar FliJ protein, at 2,441,128 to 2,441,571
_2322
HP15_2323: HP15_2323 - flagellum-specific ATP synthase FliI, at 2,441,571 to 2,442,965
_2323
Position (kb)
2441
2442 Strain fitness (log2 ratio)
-1
0
1 at 2440.156 kb on + strand, within HP15_2320 at 2440.177 kb on - strand, within HP15_2320 at 2440.304 kb on - strand, within HP15_2320 at 2440.373 kb on + strand, within HP15_2320 at 2440.376 kb on - strand, within HP15_2320 at 2440.530 kb on - strand at 2440.537 kb on + strand at 2440.650 kb on - strand at 2440.725 kb on + strand at 2440.742 kb on + strand, within HP15_2321 at 2440.903 kb on + strand, within HP15_2321 at 2441.058 kb on + strand at 2441.066 kb on - strand at 2441.074 kb on + strand at 2441.362 kb on - strand, within HP15_2322 at 2441.388 kb on + strand, within HP15_2322 at 2441.396 kb on - strand, within HP15_2322 at 2441.510 kb on - strand, within HP15_2322 at 2441.529 kb on + strand at 2441.529 kb on + strand at 2441.537 kb on - strand at 2441.545 kb on - strand at 2441.632 kb on - strand at 2441.699 kb on + strand at 2441.818 kb on - strand, within HP15_2323 at 2441.919 kb on + strand, within HP15_2323 at 2442.027 kb on + strand, within HP15_2323 at 2442.033 kb on - strand, within HP15_2323 at 2442.033 kb on - strand, within HP15_2323 at 2442.139 kb on + strand, within HP15_2323 at 2442.147 kb on - strand, within HP15_2323 at 2442.353 kb on + strand, within HP15_2323 at 2442.361 kb on - strand, within HP15_2323 at 2442.391 kb on - strand, within HP15_2323 at 2442.396 kb on + strand, within HP15_2323 at 2442.474 kb on + strand, within HP15_2323 at 2442.493 kb on - strand, within HP15_2323
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 2,440,156 + HP15_2320 0.70 -1.2 2,440,177 - HP15_2320 0.72 +0.6 2,440,304 - HP15_2320 0.79 +1.3 2,440,373 + HP15_2320 0.83 +1.0 2,440,376 - HP15_2320 0.83 +0.9 2,440,530 - -0.4 2,440,537 + -0.4 2,440,650 - -0.9 2,440,725 + +0.7 2,440,742 + HP15_2321 0.14 +0.0 2,440,903 + HP15_2321 0.66 +0.1 2,441,058 + -0.4 2,441,066 - -0.2 2,441,074 + +0.4 2,441,362 - HP15_2322 0.53 +0.7 2,441,388 + HP15_2322 0.59 +0.3 2,441,396 - HP15_2322 0.60 +1.3 2,441,510 - HP15_2322 0.86 +0.3 2,441,529 + +0.8 2,441,529 + +0.1 2,441,537 - -0.1 2,441,545 - +0.2 2,441,632 - +0.4 2,441,699 + -0.4 2,441,818 - HP15_2323 0.18 +0.1 2,441,919 + HP15_2323 0.25 +0.6 2,442,027 + HP15_2323 0.33 +0.5 2,442,033 - HP15_2323 0.33 +1.0 2,442,033 - HP15_2323 0.33 -0.4 2,442,139 + HP15_2323 0.41 -0.7 2,442,147 - HP15_2323 0.41 -0.2 2,442,353 + HP15_2323 0.56 +0.4 2,442,361 - HP15_2323 0.57 -0.7 2,442,391 - HP15_2323 0.59 +0.1 2,442,396 + HP15_2323 0.59 +0.1 2,442,474 + HP15_2323 0.65 -0.1 2,442,493 - HP15_2323 0.66 +0.2
Or see this region's nucleotide sequence