Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2309 and HP15_2310 are separated by 116 nucleotides HP15_2310 and HP15_2311 are separated by 3 nucleotides HP15_2311 and HP15_2312 are separated by 8 nucleotides HP15_2312 and HP15_2313 are separated by 4 nucleotides
HP15_2309: HP15_2309 - flagellar biosynthesis protein FlhB, at 2,431,599 to 2,432,624
_2309
HP15_2310: HP15_2310 - flagellar biosynthesis protein FliR, at 2,432,741 to 2,433,526
_2310
HP15_2311: HP15_2311 - flagellar biosynthetic protein FliQ, at 2,433,530 to 2,433,799
_2311
HP15_2312: HP15_2312 - flagellar biosynthesis protein FliP, at 2,433,808 to 2,434,584
_2312
HP15_2313: HP15_2313 - flagellar biosynthesis protein, FliO, at 2,434,589 to 2,435,038
_2313
Position (kb)
2433
2434 Strain fitness (log2 ratio)
-1
0
1 at 2432.641 kb on - strand at 2432.660 kb on + strand at 2433.022 kb on + strand, within HP15_2310 at 2433.030 kb on - strand, within HP15_2310 at 2433.051 kb on + strand, within HP15_2310 at 2433.153 kb on - strand, within HP15_2310 at 2433.153 kb on - strand, within HP15_2310 at 2433.162 kb on - strand, within HP15_2310 at 2433.170 kb on - strand, within HP15_2310 at 2433.191 kb on + strand, within HP15_2310 at 2433.199 kb on - strand, within HP15_2310 at 2433.324 kb on + strand, within HP15_2310 at 2433.362 kb on + strand, within HP15_2310 at 2433.369 kb on + strand, within HP15_2310 at 2433.385 kb on + strand, within HP15_2310 at 2433.553 kb on - strand at 2433.584 kb on - strand, within HP15_2311 at 2433.658 kb on - strand, within HP15_2311 at 2433.690 kb on + strand, within HP15_2311 at 2433.690 kb on + strand, within HP15_2311 at 2433.697 kb on + strand, within HP15_2311 at 2433.723 kb on - strand, within HP15_2311 at 2433.758 kb on - strand, within HP15_2311 at 2433.831 kb on - strand at 2433.896 kb on - strand, within HP15_2312 at 2433.925 kb on - strand, within HP15_2312 at 2434.012 kb on - strand, within HP15_2312 at 2434.062 kb on - strand, within HP15_2312 at 2434.088 kb on + strand, within HP15_2312 at 2434.144 kb on + strand, within HP15_2312 at 2434.167 kb on + strand, within HP15_2312 at 2434.175 kb on - strand, within HP15_2312 at 2434.214 kb on + strand, within HP15_2312 at 2434.263 kb on + strand, within HP15_2312 at 2434.270 kb on + strand, within HP15_2312 at 2434.293 kb on + strand, within HP15_2312 at 2434.295 kb on + strand, within HP15_2312 at 2434.395 kb on - strand, within HP15_2312 at 2434.427 kb on + strand, within HP15_2312 at 2434.542 kb on - strand at 2434.587 kb on + strand at 2434.611 kb on + strand at 2434.611 kb on + strand at 2434.705 kb on - strand, within HP15_2313 at 2434.707 kb on - strand, within HP15_2313 at 2434.731 kb on - strand, within HP15_2313 at 2434.763 kb on - strand, within HP15_2313
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 2,432,641 - +0.6 2,432,660 + +0.6 2,433,022 + HP15_2310 0.36 -0.0 2,433,030 - HP15_2310 0.37 +0.1 2,433,051 + HP15_2310 0.39 -0.0 2,433,153 - HP15_2310 0.52 +0.4 2,433,153 - HP15_2310 0.52 +0.9 2,433,162 - HP15_2310 0.54 +0.3 2,433,170 - HP15_2310 0.55 +0.2 2,433,191 + HP15_2310 0.57 +0.6 2,433,199 - HP15_2310 0.58 +1.0 2,433,324 + HP15_2310 0.74 -0.2 2,433,362 + HP15_2310 0.79 +0.1 2,433,369 + HP15_2310 0.80 +0.5 2,433,385 + HP15_2310 0.82 +0.1 2,433,553 - +0.3 2,433,584 - HP15_2311 0.20 +0.3 2,433,658 - HP15_2311 0.47 +1.3 2,433,690 + HP15_2311 0.59 +0.6 2,433,690 + HP15_2311 0.59 +0.4 2,433,697 + HP15_2311 0.62 +0.4 2,433,723 - HP15_2311 0.71 +1.5 2,433,758 - HP15_2311 0.84 -0.2 2,433,831 - +0.1 2,433,896 - HP15_2312 0.11 +0.6 2,433,925 - HP15_2312 0.15 -0.1 2,434,012 - HP15_2312 0.26 +0.4 2,434,062 - HP15_2312 0.33 +0.2 2,434,088 + HP15_2312 0.36 +0.2 2,434,144 + HP15_2312 0.43 +0.2 2,434,167 + HP15_2312 0.46 -0.1 2,434,175 - HP15_2312 0.47 -0.2 2,434,214 + HP15_2312 0.52 +1.1 2,434,263 + HP15_2312 0.59 +0.9 2,434,270 + HP15_2312 0.59 +0.2 2,434,293 + HP15_2312 0.62 +0.7 2,434,295 + HP15_2312 0.63 -0.3 2,434,395 - HP15_2312 0.76 +1.1 2,434,427 + HP15_2312 0.80 +0.3 2,434,542 - +0.5 2,434,587 + -0.0 2,434,611 + +0.6 2,434,611 + -0.4 2,434,705 - HP15_2313 0.26 +0.1 2,434,707 - HP15_2313 0.26 -0.1 2,434,731 - HP15_2313 0.32 +0.1 2,434,763 - HP15_2313 0.39 +0.4
Or see this region's nucleotide sequence