Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2044 and HP15_2045 are separated by 208 nucleotides HP15_2045 and HP15_2046 are separated by 13 nucleotides HP15_2046 and HP15_2047 are separated by 17 nucleotides
HP15_2044: HP15_2044 - aspartyl-tRNA synthetase, at 2,142,348 to 2,144,156
_2044
HP15_2045: HP15_2045 - DNA-binding transcriptional repressor FabR, at 2,144,365 to 2,144,982
_2045
HP15_2046: HP15_2046 - histidine triad (HIT) protein, at 2,144,996 to 2,145,436
_2046
HP15_2047: HP15_2047 - UDP-glucose 6-dehydrogenase, at 2,145,454 to 2,146,797
_2047
Position (kb)
2144
2145 Strain fitness (log2 ratio)
-1
0
1 at 2144.569 kb on + strand, within HP15_2045 at 2144.588 kb on - strand, within HP15_2045 at 2144.715 kb on + strand, within HP15_2045 at 2144.800 kb on + strand, within HP15_2045 at 2144.910 kb on + strand, within HP15_2045 at 2144.930 kb on - strand at 2144.964 kb on - strand at 2144.989 kb on - strand at 2145.099 kb on + strand, within HP15_2046 at 2145.100 kb on + strand, within HP15_2046 at 2145.128 kb on - strand, within HP15_2046 at 2145.128 kb on - strand, within HP15_2046 at 2145.217 kb on - strand, within HP15_2046 at 2145.324 kb on - strand, within HP15_2046 at 2145.461 kb on + strand at 2145.469 kb on - strand at 2145.469 kb on - strand at 2145.469 kb on - strand at 2145.607 kb on - strand, within HP15_2047 at 2145.668 kb on - strand, within HP15_2047 at 2145.683 kb on - strand, within HP15_2047 at 2145.773 kb on + strand, within HP15_2047 at 2145.784 kb on + strand, within HP15_2047 at 2145.875 kb on + strand, within HP15_2047
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 2,144,569 + HP15_2045 0.33 +0.2 2,144,588 - HP15_2045 0.36 -0.3 2,144,715 + HP15_2045 0.57 +0.5 2,144,800 + HP15_2045 0.70 +0.9 2,144,910 + HP15_2045 0.88 +0.5 2,144,930 - -0.3 2,144,964 - -0.9 2,144,989 - -0.1 2,145,099 + HP15_2046 0.23 +1.2 2,145,100 + HP15_2046 0.24 +0.5 2,145,128 - HP15_2046 0.30 -0.3 2,145,128 - HP15_2046 0.30 +0.1 2,145,217 - HP15_2046 0.50 -0.1 2,145,324 - HP15_2046 0.74 -1.2 2,145,461 + +0.4 2,145,469 - +0.2 2,145,469 - +0.2 2,145,469 - +0.4 2,145,607 - HP15_2047 0.11 -0.2 2,145,668 - HP15_2047 0.16 +0.3 2,145,683 - HP15_2047 0.17 -0.6 2,145,773 + HP15_2047 0.24 -0.5 2,145,784 + HP15_2047 0.25 -0.6 2,145,875 + HP15_2047 0.31 +0.9
Or see this region's nucleotide sequence