Strain Fitness in Marinobacter adhaerens HP15 around HP15_1770

Experiment: L-Glutamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1768 and HP15_1769 are separated by 41 nucleotidesHP15_1769 and HP15_1770 overlap by 4 nucleotidesHP15_1770 and HP15_1771 overlap by 4 nucleotides HP15_1768: HP15_1768 - delta 9 acyl-lipid fatty acid desaturase, at 1,866,345 to 1,866,881 _1768 HP15_1769: HP15_1769 - transcriptional regulator-related protein, at 1,866,923 to 1,867,345 _1769 HP15_1770: HP15_1770 - short-chain dehydrogenase/reductase SDR, at 1,867,342 to 1,868,142 _1770 HP15_1771: HP15_1771 - dehydrogenase, at 1,868,139 to 1,869,404 _1771 Position (kb) 1867 1868 1869Strain fitness (log2 ratio) -1 0 1 2at 1866.401 kb on - strand, within HP15_1768at 1866.445 kb on - strand, within HP15_1768at 1866.508 kb on + strand, within HP15_1768at 1866.619 kb on - strand, within HP15_1768at 1866.664 kb on + strand, within HP15_1768at 1866.716 kb on + strand, within HP15_1768at 1866.772 kb on + strand, within HP15_1768at 1866.772 kb on + strand, within HP15_1768at 1866.774 kb on - strand, within HP15_1768at 1866.799 kb on - strand, within HP15_1768at 1866.809 kb on + strand, within HP15_1768at 1866.862 kb on - strandat 1867.035 kb on + strand, within HP15_1769at 1867.036 kb on - strand, within HP15_1769at 1867.155 kb on + strand, within HP15_1769at 1867.155 kb on + strand, within HP15_1769at 1867.158 kb on - strand, within HP15_1769at 1867.158 kb on - strand, within HP15_1769at 1867.163 kb on - strand, within HP15_1769at 1867.163 kb on - strand, within HP15_1769at 1867.218 kb on - strand, within HP15_1769at 1867.535 kb on + strand, within HP15_1770at 1867.582 kb on + strand, within HP15_1770at 1867.638 kb on + strand, within HP15_1770at 1867.673 kb on - strand, within HP15_1770at 1867.674 kb on - strand, within HP15_1770at 1867.703 kb on + strand, within HP15_1770at 1867.734 kb on + strand, within HP15_1770at 1868.232 kb on - strandat 1868.300 kb on - strand, within HP15_1771at 1868.314 kb on - strand, within HP15_1771at 1868.314 kb on - strand, within HP15_1771at 1868.408 kb on - strand, within HP15_1771at 1868.430 kb on + strand, within HP15_1771at 1868.510 kb on + strand, within HP15_1771at 1868.584 kb on + strand, within HP15_1771at 1868.643 kb on + strand, within HP15_1771at 1868.727 kb on + strand, within HP15_1771at 1868.832 kb on + strand, within HP15_1771at 1868.908 kb on + strand, within HP15_1771at 1868.953 kb on - strand, within HP15_1771at 1868.997 kb on + strand, within HP15_1771at 1869.019 kb on - strand, within HP15_1771at 1869.019 kb on - strand, within HP15_1771at 1869.093 kb on - strand, within HP15_1771at 1869.103 kb on + strand, within HP15_1771at 1869.120 kb on + strand, within HP15_1771

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N)
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1,866,401 - HP15_1768 0.10 +0.4
1,866,445 - HP15_1768 0.19 +0.8
1,866,508 + HP15_1768 0.30 -1.2
1,866,619 - HP15_1768 0.51 +0.5
1,866,664 + HP15_1768 0.59 +0.3
1,866,716 + HP15_1768 0.69 -0.3
1,866,772 + HP15_1768 0.80 +0.0
1,866,772 + HP15_1768 0.80 -0.1
1,866,774 - HP15_1768 0.80 +0.0
1,866,799 - HP15_1768 0.85 -0.4
1,866,809 + HP15_1768 0.86 +0.2
1,866,862 - +1.7
1,867,035 + HP15_1769 0.26 +0.2
1,867,036 - HP15_1769 0.27 +0.6
1,867,155 + HP15_1769 0.55 -0.0
1,867,155 + HP15_1769 0.55 -0.2
1,867,158 - HP15_1769 0.56 +0.7
1,867,158 - HP15_1769 0.56 +0.5
1,867,163 - HP15_1769 0.57 -0.8
1,867,163 - HP15_1769 0.57 -1.3
1,867,218 - HP15_1769 0.70 -0.0
1,867,535 + HP15_1770 0.24 -0.0
1,867,582 + HP15_1770 0.30 +2.1
1,867,638 + HP15_1770 0.37 +1.0
1,867,673 - HP15_1770 0.41 +0.5
1,867,674 - HP15_1770 0.41 +0.8
1,867,703 + HP15_1770 0.45 -1.7
1,867,734 + HP15_1770 0.49 +1.2
1,868,232 - +0.9
1,868,300 - HP15_1771 0.13 -0.1
1,868,314 - HP15_1771 0.14 -0.1
1,868,314 - HP15_1771 0.14 -1.2
1,868,408 - HP15_1771 0.21 +0.4
1,868,430 + HP15_1771 0.23 +0.3
1,868,510 + HP15_1771 0.29 -1.0
1,868,584 + HP15_1771 0.35 +0.1
1,868,643 + HP15_1771 0.40 -0.2
1,868,727 + HP15_1771 0.46 +0.5
1,868,832 + HP15_1771 0.55 -0.0
1,868,908 + HP15_1771 0.61 -1.0
1,868,953 - HP15_1771 0.64 +0.2
1,868,997 + HP15_1771 0.68 -0.8
1,869,019 - HP15_1771 0.70 +0.1
1,869,019 - HP15_1771 0.70 -1.6
1,869,093 - HP15_1771 0.75 +0.4
1,869,103 + HP15_1771 0.76 +0.1
1,869,120 + HP15_1771 0.77 +0.8

Or see this region's nucleotide sequence