Strain Fitness in Marinobacter adhaerens HP15 around HP15_1699

Experiment: L-Glutamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1698 and HP15_1699 are separated by 616 nucleotidesHP15_1699 and HP15_1700 are separated by 97 nucleotides HP15_1698: HP15_1698 - NADH-dependent flavin oxidoreductase, at 1,787,420 to 1,788,622 _1698 HP15_1699: HP15_1699 - resolvase, at 1,789,239 to 1,789,835 _1699 HP15_1700: HP15_1700 - conserved hypothetical protein, at 1,789,933 to 1,794,552 _1700 Position (kb) 1789 1790Strain fitness (log2 ratio) -1 0 1 2at 1788.259 kb on + strand, within HP15_1698at 1788.260 kb on + strand, within HP15_1698at 1788.342 kb on + strand, within HP15_1698at 1788.368 kb on + strand, within HP15_1698at 1788.582 kb on - strandat 1788.646 kb on + strandat 1788.709 kb on + strandat 1788.856 kb on - strandat 1788.856 kb on - strandat 1788.858 kb on + strandat 1788.866 kb on - strandat 1788.952 kb on - strandat 1789.083 kb on - strandat 1789.088 kb on - strandat 1789.179 kb on + strandat 1789.196 kb on + strandat 1789.196 kb on + strandat 1789.209 kb on + strandat 1789.251 kb on + strandat 1789.290 kb on - strandat 1789.301 kb on + strand, within HP15_1699at 1789.461 kb on - strand, within HP15_1699at 1789.637 kb on + strand, within HP15_1699at 1789.637 kb on + strand, within HP15_1699at 1789.637 kb on + strand, within HP15_1699at 1789.645 kb on - strand, within HP15_1699at 1789.645 kb on - strand, within HP15_1699at 1789.683 kb on - strand, within HP15_1699at 1789.695 kb on - strand, within HP15_1699at 1789.836 kb on + strandat 1790.278 kb on + strandat 1790.702 kb on + strand, within HP15_1700at 1790.710 kb on - strand, within HP15_1700

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N)
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1,788,259 + HP15_1698 0.70 -0.1
1,788,260 + HP15_1698 0.70 -0.3
1,788,342 + HP15_1698 0.77 +0.6
1,788,368 + HP15_1698 0.79 -0.1
1,788,582 - -0.2
1,788,646 + -0.8
1,788,709 + -0.3
1,788,856 - +0.5
1,788,856 - +0.5
1,788,858 + -1.4
1,788,866 - -0.7
1,788,952 - +0.0
1,789,083 - -0.3
1,789,088 - -0.7
1,789,179 + -0.7
1,789,196 + -0.4
1,789,196 + -0.6
1,789,209 + +0.6
1,789,251 + +0.1
1,789,290 - +1.2
1,789,301 + HP15_1699 0.10 -0.4
1,789,461 - HP15_1699 0.37 +0.9
1,789,637 + HP15_1699 0.67 -0.3
1,789,637 + HP15_1699 0.67 +1.3
1,789,637 + HP15_1699 0.67 -0.3
1,789,645 - HP15_1699 0.68 -0.0
1,789,645 - HP15_1699 0.68 +2.6
1,789,683 - HP15_1699 0.74 +0.2
1,789,695 - HP15_1699 0.76 +0.8
1,789,836 + +0.6
1,790,278 + -0.8
1,790,702 + HP15_1700 0.17 +1.1
1,790,710 - HP15_1700 0.17 -0.2

Or see this region's nucleotide sequence