Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1448 and HP15_1449 are separated by 48 nucleotides HP15_1449 and HP15_1450 are separated by 9 nucleotides HP15_1450 and HP15_1451 are separated by 66 nucleotides
HP15_1448: HP15_1448 - conserved hypothetical protein, secreted, at 1,524,284 to 1,525,135
_1448
HP15_1449: HP15_1449 - ABC transporter, ATP-binding protein, at 1,525,184 to 1,525,978
_1449
HP15_1450: HP15_1450 - inner-membrane translocator, at 1,525,988 to 1,526,890
_1450
HP15_1451: HP15_1451 - ABC-type uncharacterized transport system, periplasmic component, at 1,526,957 to 1,527,931
_1451
Position (kb)
1525
1526
1527 Strain fitness (log2 ratio)
-1
0
1
2 at 1525.047 kb on + strand, within HP15_1448 at 1525.062 kb on - strand at 1525.114 kb on + strand at 1525.120 kb on + strand at 1525.128 kb on - strand at 1525.128 kb on - strand at 1525.168 kb on - strand at 1525.213 kb on + strand at 1525.258 kb on + strand at 1525.266 kb on - strand, within HP15_1449 at 1525.323 kb on - strand, within HP15_1449 at 1525.439 kb on - strand, within HP15_1449 at 1525.525 kb on - strand, within HP15_1449 at 1525.537 kb on + strand, within HP15_1449 at 1525.626 kb on + strand, within HP15_1449 at 1525.771 kb on + strand, within HP15_1449 at 1525.779 kb on - strand, within HP15_1449 at 1525.896 kb on - strand, within HP15_1449 at 1526.026 kb on + strand at 1526.053 kb on + strand at 1526.190 kb on - strand, within HP15_1450 at 1526.230 kb on + strand, within HP15_1450 at 1526.276 kb on - strand, within HP15_1450 at 1526.316 kb on - strand, within HP15_1450 at 1526.506 kb on + strand, within HP15_1450 at 1526.594 kb on - strand, within HP15_1450 at 1526.611 kb on + strand, within HP15_1450 at 1526.725 kb on + strand, within HP15_1450 at 1526.838 kb on + strand at 1527.177 kb on - strand, within HP15_1451 at 1527.305 kb on - strand, within HP15_1451 at 1527.323 kb on + strand, within HP15_1451 at 1527.354 kb on + strand, within HP15_1451 at 1527.364 kb on + strand, within HP15_1451 at 1527.372 kb on - strand, within HP15_1451 at 1527.372 kb on - strand, within HP15_1451 at 1527.372 kb on - strand, within HP15_1451 at 1527.434 kb on + strand, within HP15_1451 at 1527.434 kb on + strand, within HP15_1451 at 1527.434 kb on + strand, within HP15_1451 at 1527.442 kb on - strand, within HP15_1451 at 1527.608 kb on + strand, within HP15_1451 at 1527.742 kb on + strand, within HP15_1451 at 1527.757 kb on - strand, within HP15_1451 at 1527.760 kb on + strand, within HP15_1451 at 1527.799 kb on + strand, within HP15_1451 at 1527.821 kb on + strand, within HP15_1451
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 1,525,047 + HP15_1448 0.90 +0.2 1,525,062 - -0.1 1,525,114 + -0.4 1,525,120 + -0.6 1,525,128 - -1.1 1,525,128 - -0.4 1,525,168 - -0.6 1,525,213 + -0.1 1,525,258 + -1.2 1,525,266 - HP15_1449 0.10 -0.3 1,525,323 - HP15_1449 0.17 +0.5 1,525,439 - HP15_1449 0.32 +0.0 1,525,525 - HP15_1449 0.43 +1.0 1,525,537 + HP15_1449 0.44 +0.7 1,525,626 + HP15_1449 0.56 -0.2 1,525,771 + HP15_1449 0.74 -0.0 1,525,779 - HP15_1449 0.75 +0.7 1,525,896 - HP15_1449 0.90 +0.0 1,526,026 + +0.0 1,526,053 + +0.7 1,526,190 - HP15_1450 0.22 +0.6 1,526,230 + HP15_1450 0.27 +0.3 1,526,276 - HP15_1450 0.32 +0.1 1,526,316 - HP15_1450 0.36 +0.1 1,526,506 + HP15_1450 0.57 +0.7 1,526,594 - HP15_1450 0.67 +0.4 1,526,611 + HP15_1450 0.69 +0.6 1,526,725 + HP15_1450 0.82 +0.4 1,526,838 + +0.1 1,527,177 - HP15_1451 0.23 +0.2 1,527,305 - HP15_1451 0.36 +0.5 1,527,323 + HP15_1451 0.38 -0.7 1,527,354 + HP15_1451 0.41 +0.4 1,527,364 + HP15_1451 0.42 -0.1 1,527,372 - HP15_1451 0.43 +1.1 1,527,372 - HP15_1451 0.43 +0.3 1,527,372 - HP15_1451 0.43 +1.8 1,527,434 + HP15_1451 0.49 +0.0 1,527,434 + HP15_1451 0.49 -1.2 1,527,434 + HP15_1451 0.49 -0.8 1,527,442 - HP15_1451 0.50 +1.6 1,527,608 + HP15_1451 0.67 +2.6 1,527,742 + HP15_1451 0.81 -0.1 1,527,757 - HP15_1451 0.82 +1.0 1,527,760 + HP15_1451 0.82 -1.4 1,527,799 + HP15_1451 0.86 -0.1 1,527,821 + HP15_1451 0.89 -0.3
Or see this region's nucleotide sequence