Strain Fitness in Marinobacter adhaerens HP15 around HP15_1450

Experiment: L-Glutamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1448 and HP15_1449 are separated by 48 nucleotidesHP15_1449 and HP15_1450 are separated by 9 nucleotidesHP15_1450 and HP15_1451 are separated by 66 nucleotides HP15_1448: HP15_1448 - conserved hypothetical protein, secreted, at 1,524,284 to 1,525,135 _1448 HP15_1449: HP15_1449 - ABC transporter, ATP-binding protein, at 1,525,184 to 1,525,978 _1449 HP15_1450: HP15_1450 - inner-membrane translocator, at 1,525,988 to 1,526,890 _1450 HP15_1451: HP15_1451 - ABC-type uncharacterized transport system, periplasmic component, at 1,526,957 to 1,527,931 _1451 Position (kb) 1525 1526 1527Strain fitness (log2 ratio) -1 0 1 2at 1525.047 kb on + strand, within HP15_1448at 1525.062 kb on - strandat 1525.114 kb on + strandat 1525.120 kb on + strandat 1525.128 kb on - strandat 1525.128 kb on - strandat 1525.168 kb on - strandat 1525.213 kb on + strandat 1525.258 kb on + strandat 1525.266 kb on - strand, within HP15_1449at 1525.323 kb on - strand, within HP15_1449at 1525.439 kb on - strand, within HP15_1449at 1525.525 kb on - strand, within HP15_1449at 1525.537 kb on + strand, within HP15_1449at 1525.626 kb on + strand, within HP15_1449at 1525.771 kb on + strand, within HP15_1449at 1525.779 kb on - strand, within HP15_1449at 1525.896 kb on - strand, within HP15_1449at 1526.026 kb on + strandat 1526.053 kb on + strandat 1526.190 kb on - strand, within HP15_1450at 1526.230 kb on + strand, within HP15_1450at 1526.276 kb on - strand, within HP15_1450at 1526.316 kb on - strand, within HP15_1450at 1526.506 kb on + strand, within HP15_1450at 1526.594 kb on - strand, within HP15_1450at 1526.611 kb on + strand, within HP15_1450at 1526.725 kb on + strand, within HP15_1450at 1526.838 kb on + strandat 1527.177 kb on - strand, within HP15_1451at 1527.305 kb on - strand, within HP15_1451at 1527.323 kb on + strand, within HP15_1451at 1527.354 kb on + strand, within HP15_1451at 1527.364 kb on + strand, within HP15_1451at 1527.372 kb on - strand, within HP15_1451at 1527.372 kb on - strand, within HP15_1451at 1527.372 kb on - strand, within HP15_1451at 1527.434 kb on + strand, within HP15_1451at 1527.434 kb on + strand, within HP15_1451at 1527.434 kb on + strand, within HP15_1451at 1527.442 kb on - strand, within HP15_1451at 1527.608 kb on + strand, within HP15_1451at 1527.742 kb on + strand, within HP15_1451at 1527.757 kb on - strand, within HP15_1451at 1527.760 kb on + strand, within HP15_1451at 1527.799 kb on + strand, within HP15_1451at 1527.821 kb on + strand, within HP15_1451

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N)
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1,525,047 + HP15_1448 0.90 +0.2
1,525,062 - -0.1
1,525,114 + -0.4
1,525,120 + -0.6
1,525,128 - -1.1
1,525,128 - -0.4
1,525,168 - -0.6
1,525,213 + -0.1
1,525,258 + -1.2
1,525,266 - HP15_1449 0.10 -0.3
1,525,323 - HP15_1449 0.17 +0.5
1,525,439 - HP15_1449 0.32 +0.0
1,525,525 - HP15_1449 0.43 +1.0
1,525,537 + HP15_1449 0.44 +0.7
1,525,626 + HP15_1449 0.56 -0.2
1,525,771 + HP15_1449 0.74 -0.0
1,525,779 - HP15_1449 0.75 +0.7
1,525,896 - HP15_1449 0.90 +0.0
1,526,026 + +0.0
1,526,053 + +0.7
1,526,190 - HP15_1450 0.22 +0.6
1,526,230 + HP15_1450 0.27 +0.3
1,526,276 - HP15_1450 0.32 +0.1
1,526,316 - HP15_1450 0.36 +0.1
1,526,506 + HP15_1450 0.57 +0.7
1,526,594 - HP15_1450 0.67 +0.4
1,526,611 + HP15_1450 0.69 +0.6
1,526,725 + HP15_1450 0.82 +0.4
1,526,838 + +0.1
1,527,177 - HP15_1451 0.23 +0.2
1,527,305 - HP15_1451 0.36 +0.5
1,527,323 + HP15_1451 0.38 -0.7
1,527,354 + HP15_1451 0.41 +0.4
1,527,364 + HP15_1451 0.42 -0.1
1,527,372 - HP15_1451 0.43 +1.1
1,527,372 - HP15_1451 0.43 +0.3
1,527,372 - HP15_1451 0.43 +1.8
1,527,434 + HP15_1451 0.49 +0.0
1,527,434 + HP15_1451 0.49 -1.2
1,527,434 + HP15_1451 0.49 -0.8
1,527,442 - HP15_1451 0.50 +1.6
1,527,608 + HP15_1451 0.67 +2.6
1,527,742 + HP15_1451 0.81 -0.1
1,527,757 - HP15_1451 0.82 +1.0
1,527,760 + HP15_1451 0.82 -1.4
1,527,799 + HP15_1451 0.86 -0.1
1,527,821 + HP15_1451 0.89 -0.3

Or see this region's nucleotide sequence