Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1514

Experiment: Formate/Acetate-Sulfite (10/60-20 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (10/60-20 mM)
1,583,281	-		DVU1511	0.77	+1.5
1,583,293	+		DVU1511	0.82	-0.8
1,583,434	+				-1.8
1,583,442	-				+0.4
1,583,498	+				-0.2
1,583,513	+				-0.3
1,583,558	+				+1.3
1,583,582	+				-0.1
1,583,582	+				+0.2
1,583,590	-				-0.1
1,583,590	-				+0.3
1,583,702	+		DVU1513	0.24	+0.3
1,583,703	+		DVU1513	0.24	-0.1
1,583,710	-		DVU1513	0.25	+0.3
1,583,837	-		DVU1513	0.51	-0.7
1,583,898	+		DVU1513	0.63	+0.2
1,583,906	-		DVU1513	0.65	+0.4
1,583,947	-		DVU1513	0.73	+0.2
1,583,998	+		DVU1513	0.84	-0.7
1,584,002	+		DVU1513	0.84	-0.8
1,584,006	-		DVU1513	0.85	+0.1
1,584,026	+		DVU1513	0.89	+0.1
1,584,026	+		DVU1513	0.89	-0.1
1,584,034	+				-0.1
1,584,049	+				+0.4
1,584,083	-				-0.7
1,584,088	-				-1.7
1,584,138	-				-0.5
1,584,147	+				+0.1
1,584,176	+				+0.1
1,584,274	+				+0.3
1,584,393	+		DVU1514	0.12	-2.0
1,584,393	+		DVU1514	0.12	-1.7
1,584,401	-		DVU1514	0.13	-0.1
1,584,401	-		DVU1514	0.13	-1.4
1,584,401	-		DVU1514	0.13	-1.1
1,584,406	-		DVU1514	0.13	-0.0
1,584,436	-		DVU1514	0.16	-0.4
1,584,436	-		DVU1514	0.16	+0.3
1,584,436	-		DVU1514	0.16	-1.2
1,584,493	+		DVU1514	0.20	-1.1
1,584,500	+		DVU1514	0.21	-1.0
1,584,538	+		DVU1514	0.24	+0.7
1,584,538	+		DVU1514	0.24	-0.5
1,584,546	-		DVU1514	0.25	-1.2
1,584,568	+		DVU1514	0.26	+1.3
1,584,584	-		DVU1514	0.28	-0.1
1,584,602	+		DVU1514	0.29	-0.0
1,584,683	-		DVU1514	0.36	+0.8
1,584,740	-		DVU1514	0.40	-0.6
1,584,744	+		DVU1514	0.41	-0.0
1,584,757	-		DVU1514	0.42	+0.2
1,584,759	+		DVU1514	0.42	-0.3
1,584,824	-		DVU1514	0.47	-1.4
1,584,844	-		DVU1514	0.49	+0.6
1,584,891	-		DVU1514	0.53	+1.1
1,584,903	+		DVU1514	0.54	+0.5
1,584,911	-		DVU1514	0.55	-1.0
1,584,971	-		DVU1514	0.59	-0.5
1,585,175	+		DVU1514	0.76	-0.5
1,585,175	+		DVU1514	0.76	+0.3
1,585,175	+		DVU1514	0.76	-0.4
1,585,181	+		DVU1514	0.77	-1.2
1,585,217	-		DVU1514	0.80	-0.1
1,585,226	+		DVU1514	0.80	-0.5
1,585,259	-		DVU1514	0.83	-0.5
1,585,293	+		DVU1514	0.86	-0.0
1,585,293	+		DVU1514	0.86	+0.1
1,585,293	+		DVU1514	0.86	-0.3
1,585,301	-		DVU1514	0.87	-0.6
1,585,339	+		DVU1514	0.90	-2.5
1,585,339	+		DVU1514	0.90	-0.4
1,585,339	+		DVU1514	0.90	+0.0
1,585,339	+		DVU1514	0.90	-0.7
1,585,339	+		DVU1514	0.90	+0.4
1,585,339	+		DVU1514	0.90	-0.6
1,585,347	-				-0.7
1,585,409	+				+0.0
1,585,415	+				-0.6
1,585,415	+				+0.3
1,585,415	+				+0.2
1,585,417	-				-1.3
1,585,423	-				-0.5
1,585,423	-				+0.2
1,585,690	-	dcm	DVU1515	0.16	-1.3
1,585,716	-	dcm	DVU1515	0.17	-0.1
1,585,716	-	dcm	DVU1515	0.17	-0.5
1,585,758	+	dcm	DVU1515	0.20	-0.5
1,585,829	+	dcm	DVU1515	0.25	-0.0
1,585,829	+	dcm	DVU1515	0.25	+0.1
1,585,868	+	dcm	DVU1515	0.28	-0.8
1,585,868	+	dcm	DVU1515	0.28	+0.5
1,585,871	-	dcm	DVU1515	0.28	-0.1
1,586,034	+	dcm	DVU1515	0.39	+0.4
1,586,208	-	dcm	DVU1515	0.51	+1.0
1,586,213	+	dcm	DVU1515	0.51	+0.3
1,586,258	-	dcm	DVU1515	0.54	-2.3
1,586,424	+	dcm	DVU1515	0.66	-0.4