Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2927

Experiment: BHIS with Sulfamethizole 0.1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Sulfamethizole 0.1 mM
3,676,740	+		BT2926	0.11	-1.3
3,676,740	+		BT2926	0.11	-0.9
3,676,747	+		BT2926	0.11	-1.3
3,676,777	+		BT2926	0.14	-1.7
3,676,777	+		BT2926	0.14	-0.9
3,676,777	+		BT2926	0.14	-0.4
3,676,777	+		BT2926	0.14	-1.8
3,676,778	-		BT2926	0.14	-1.4
3,676,795	+		BT2926	0.16	-1.3
3,676,798	+		BT2926	0.16	-0.8
3,676,799	-		BT2926	0.16	-0.2
3,676,801	+		BT2926	0.16	-2.0
3,676,802	-		BT2926	0.16	-1.1
3,676,831	+		BT2926	0.19	+0.2
3,676,842	+		BT2926	0.20	-0.8
3,676,857	+		BT2926	0.21	-0.8
3,676,873	+		BT2926	0.23	+0.2
3,676,874	-				+1.8
3,676,885	+		BT2926	0.24	-2.1
3,676,912	-		BT2926	0.26	-0.2
3,676,912	-		BT2926	0.26	-2.3
3,676,944	+		BT2926	0.29	+0.2
3,676,984	+		BT2926	0.33	-0.1
3,676,985	-		BT2926	0.33	-0.3
3,676,994	+		BT2926	0.34	-1.3
3,676,995	-		BT2926	0.34	-0.3
3,676,995	-		BT2926	0.34	-1.1
3,677,039	-		BT2926	0.38	+1.2
3,677,039	-		BT2926	0.38	-3.0
3,677,044	+		BT2926	0.38	-1.8
3,677,044	+		BT2926	0.38	-1.8
3,677,052	-		BT2926	0.39	-2.6
3,677,095	+		BT2926	0.43	+0.2
3,677,096	-		BT2926	0.43	+0.8
3,677,108	-		BT2926	0.44	-1.3
3,677,108	-		BT2926	0.44	-1.1
3,677,108	-		BT2926	0.44	-1.6
3,677,108	-		BT2926	0.44	-0.5
3,677,108	-		BT2926	0.44	-0.8
3,677,123	-		BT2926	0.45	-1.3
3,677,171	+		BT2926	0.49	-0.8
3,677,171	+		BT2926	0.49	-0.7
3,677,171	+		BT2926	0.49	-1.2
3,677,221	+		BT2926	0.54	-1.2
3,677,227	-		BT2926	0.54	-1.3
3,677,231	+		BT2926	0.55	+0.2
3,677,231	+		BT2926	0.55	-1.3
3,677,231	+		BT2926	0.55	-1.8
3,677,266	-		BT2926	0.58	+1.8
3,677,306	+		BT2926	0.61	+0.2
3,677,307	-		BT2926	0.61	-1.8
3,677,310	+		BT2926	0.62	-0.9
3,677,310	+		BT2926	0.62	-1.4
3,677,310	+		BT2926	0.62	-1.0
3,677,311	-		BT2926	0.62	-0.7
3,677,312	+		BT2926	0.62	-2.7
3,677,350	+		BT2926	0.65	-0.8
3,677,350	+		BT2926	0.65	+2.2
3,677,351	-		BT2926	0.65	-0.3
3,677,351	-		BT2926	0.65	-1.1
3,677,366	+		BT2926	0.67	-0.8
3,677,373	-		BT2926	0.67	-0.3
3,677,434	-		BT2926	0.73	-1.7
3,677,437	+		BT2926	0.73	-1.1
3,677,444	-		BT2926	0.74	-1.6
3,677,444	-		BT2926	0.74	-1.3
3,677,445	+		BT2926	0.74	+0.2
3,677,472	-		BT2926	0.76	+0.2
3,677,476	+		BT2926	0.77	+0.2
3,677,533	+		BT2926	0.82	-0.5
3,677,533	+		BT2926	0.82	-1.4
3,677,534	-		BT2926	0.82	-0.1
3,677,537	-		BT2926	0.82	-0.3
3,677,537	-		BT2926	0.82	-1.6
3,677,538	+		BT2926	0.82	+0.2
3,677,539	-		BT2926	0.82	-2.3
3,677,540	+		BT2926	0.82	-0.8
3,677,540	+		BT2926	0.82	-0.5
3,677,540	+		BT2926	0.82	+0.2
3,677,541	-		BT2926	0.82	+0.2
3,677,541	-		BT2926	0.82	-0.3
3,677,541	-		BT2926	0.82	-2.1
3,677,642	+				-0.9
3,677,645	-				+0.5
3,677,693	+				-0.8
3,677,694	-				-0.3
3,677,694	-				-2.5
3,677,702	+				-0.8
3,677,703	-				+1.2
3,677,703	-				-1.0
3,677,706	+				-1.3
3,677,706	+				-0.7
3,677,707	-				-1.3
3,677,708	+				-1.8
3,677,709	-				-0.9
3,677,759	-				-2.4
3,677,796	+				-0.7
3,677,826	-				+0.2
3,677,826	-				+0.2
3,677,830	-				-0.1
3,677,832	+				-2.0
3,677,838	+				+1.8
3,677,839	-				+0.2
3,677,839	-				-1.7
3,677,839	-				-0.1
3,677,846	+				-0.9
3,677,849	+				-0.4
3,677,853	+				+0.2
3,677,863	+				+0.2
3,677,886	+				-0.2
3,677,919	-				+0.2
3,677,938	+				-0.8
3,677,938	+				-1.2
3,677,938	+				-1.3
3,677,939	-				-2.9
3,677,939	-				+1.8
3,677,939	-				-0.3
3,677,949	+				-1.0
3,677,950	-				-2.3
3,677,963	-				-0.5
3,677,979	+				-2.1
3,677,990	+				-0.8
3,677,991	-				-2.8
3,677,994	+				-0.8
3,677,995	-				-0.2
3,678,006	+				-1.0
3,678,006	+				+1.2
3,678,016	-				-0.5
3,678,019	-				-1.6
3,678,028	+				+0.8
3,678,029	-				-2.6
3,678,033	+				-1.1
3,678,033	+				+0.2
3,678,054	+				-0.9
3,678,055	-				-0.2
3,678,056	+				-1.0
3,678,056	+				-0.2
3,678,088	-		BT2927	0.11	+0.2
3,678,115	-		BT2927	0.12	-0.5
3,678,123	+		BT2927	0.12	-1.7
3,678,123	+		BT2927	0.12	-1.6
3,678,124	-		BT2927	0.12	-0.1
3,678,125	+		BT2927	0.12	+1.8
3,678,147	-		BT2927	0.13	-0.6
3,678,147	-		BT2927	0.13	+0.2
3,678,154	-		BT2927	0.13	-0.8
3,678,164	+		BT2927	0.13	+1.2
3,678,210	+		BT2927	0.15	-1.2
3,678,217	-		BT2927	0.15	-1.6
3,678,217	-		BT2927	0.15	-1.8
3,678,290	+		BT2927	0.17	-0.9
3,678,290	+		BT2927	0.17	-0.3
3,678,301	+		BT2927	0.17	-0.5
3,678,309	+		BT2927	0.18	+0.2
3,678,309	+		BT2927	0.18	-0.8
3,678,318	+		BT2927	0.18	-1.2
3,678,318	+		BT2927	0.18	-0.1
3,678,356	+		BT2927	0.19	-2.6
3,678,386	-		BT2927	0.20	-0.8
3,678,388	+		BT2927	0.20	-0.2
3,678,403	-		BT2927	0.21	-0.3
3,678,407	+		BT2927	0.21	+0.2
3,678,413	+		BT2927	0.21	-0.8
3,678,413	+		BT2927	0.21	-0.8
3,678,413	+		BT2927	0.21	+0.2
3,678,414	-		BT2927	0.21	+0.2
3,678,482	+		BT2927	0.23	-1.1
3,678,483	-		BT2927	0.23	+1.8
3,678,498	-		BT2927	0.24	+0.5
3,678,504	-		BT2927	0.24	+0.2
3,678,549	+		BT2927	0.25	+0.2
3,678,549	+		BT2927	0.25	-0.8
3,678,549	+		BT2927	0.25	-0.7
3,678,550	-		BT2927	0.25	+0.2
3,678,551	+		BT2927	0.25	+0.2
3,678,552	-		BT2927	0.25	-1.7
3,678,552	-		BT2927	0.25	+0.1
3,678,564	+		BT2927	0.26	-1.8
3,678,564	+		BT2927	0.26	-0.8
3,678,565	-		BT2927	0.26	-0.7
3,678,565	-		BT2927	0.26	-0.2
3,678,606	-		BT2927	0.27	-1.3
3,678,676	-		BT2927	0.29	-1.6
3,678,706	-		BT2927	0.30	-0.9
3,678,710	+		BT2927	0.30	+0.2
3,678,711	-				+0.2
3,678,711	-		BT2927	0.30	-0.8
3,678,770	+		BT2927	0.32	-1.8
3,678,771	-		BT2927	0.32	-1.2
3,678,771	-		BT2927	0.32	+2.1
3,678,802	-		BT2927	0.33	-1.1
3,678,802	-		BT2927	0.33	-1.7
3,678,803	+		BT2927	0.33	-0.7
3,678,804	-		BT2927	0.33	-2.6
3,678,808	-		BT2927	0.33	-0.6
3,678,808	-		BT2927	0.33	-0.9
3,678,850	-		BT2927	0.34	+0.9
3,678,921	+		BT2927	0.37	+1.2
3,678,962	+		BT2927	0.38	+1.6
3,678,962	+		BT2927	0.38	-0.8
3,678,968	-		BT2927	0.38	-1.8
3,678,968	-		BT2927	0.38	-1.1
3,679,013	-		BT2927	0.39	-0.8
3,679,091	+		BT2927	0.42	+0.2
3,679,183	-		BT2927	0.45	-0.8
3,679,192	+		BT2927	0.45	+1.2
3,679,195	+		BT2927	0.45	-0.3
3,679,211	+		BT2927	0.46	-1.4
3,679,211	+		BT2927	0.46	-1.9
3,679,244	+		BT2927	0.47	-0.8
3,679,244	+		BT2927	0.47	+0.2
3,679,244	+		BT2927	0.47	+0.5
3,679,244	+		BT2927	0.47	+0.7
3,679,249	-		BT2927	0.47	+0.2
3,679,265	-		BT2927	0.47	+0.2
3,679,299	+		BT2927	0.48	+0.2
3,679,317	-		BT2927	0.49	-0.3
3,679,330	+		BT2927	0.49	+0.2
3,679,330	+		BT2927	0.49	-0.1
3,679,331	-		BT2927	0.49	-0.5
3,679,348	+		BT2927	0.50	-0.8
3,679,403	+		BT2927	0.52	-0.6
3,679,403	+		BT2927	0.52	-0.8
3,679,403	+		BT2927	0.52	-1.0
3,679,403	+		BT2927	0.52	-0.6
3,679,404	-		BT2927	0.52	-1.2
3,679,426	-		BT2927	0.52	-0.8
3,679,433	+		BT2927	0.52	-0.6
3,679,466	+		BT2927	0.54	+0.2
3,679,468	+		BT2927	0.54	-0.8
3,679,468	+		BT2927	0.54	-0.8
3,679,472	+		BT2927	0.54	-0.1
3,679,472	+		BT2927	0.54	-2.3
3,679,473	-		BT2927	0.54	-1.2
3,679,542	-		BT2927	0.56	-0.5
3,679,548	-				+0.7
3,679,621	-		BT2927	0.58	+0.2
3,679,626	+		BT2927	0.58	-0.0
3,679,626	+		BT2927	0.58	-0.0
3,679,627	-		BT2927	0.59	-0.5
3,679,688	+		BT2927	0.60	-0.8
3,679,691	+		BT2927	0.60	-1.5
3,679,770	+		BT2927	0.63	-1.3
3,679,770	+		BT2927	0.63	-1.3
3,679,770	+		BT2927	0.63	+0.2
3,679,770	+		BT2927	0.63	-2.0
3,679,780	-		BT2927	0.63	-2.6
3,679,835	+		BT2927	0.65	-2.3
3,679,844	+		BT2927	0.65	-2.5
3,679,846	+		BT2927	0.65	-0.4
3,679,847	-		BT2927	0.65	+0.2
3,679,851	+		BT2927	0.65	-2.8
3,679,851	+		BT2927	0.65	-0.6
3,679,886	+		BT2927	0.67	-1.8
3,679,886	+		BT2927	0.67	-1.0
3,679,986	-		BT2927	0.70	-1.9
3,680,074	-		BT2927	0.72	+0.5
3,680,075	+		BT2927	0.72	-0.5
3,680,075	+		BT2927	0.72	-0.6
3,680,075	+		BT2927	0.72	-0.8
3,680,125	-		BT2927	0.74	-0.8
3,680,141	+		BT2927	0.74	-1.8
3,680,142	-		BT2927	0.74	+1.0
3,680,146	+		BT2927	0.75	-1.0
3,680,147	-		BT2927	0.75	+1.2
3,680,151	+		BT2927	0.75	-1.8
3,680,152	-		BT2927	0.75	+0.2
3,680,152	-		BT2927	0.75	-2.2
3,680,152	-		BT2927	0.75	-1.5
3,680,167	-		BT2927	0.75	-1.0
3,680,167	-		BT2927	0.75	-0.8
3,680,216	-		BT2927	0.77	-1.8
3,680,249	+		BT2927	0.78	-2.5
3,680,249	+		BT2927	0.78	-1.2
3,680,250	-		BT2927	0.78	+0.2
3,680,250	-		BT2927	0.78	+0.1
3,680,250	-		BT2927	0.78	+0.2
3,680,250	-		BT2927	0.78	-0.8
3,680,252	+		BT2927	0.78	-0.8
3,680,265	+		BT2927	0.78	-1.2
3,680,318	+		BT2927	0.80	-0.8
3,680,319	-				+0.2
3,680,319	-		BT2927	0.80	-1.8
3,680,421	+		BT2927	0.83	-0.6
3,680,475	+		BT2927	0.85	-1.0
3,680,476	-		BT2927	0.85	-0.1
3,680,484	+		BT2927	0.85	-0.3
3,680,485	-		BT2927	0.85	+1.2
3,680,558	+		BT2927	0.87	-1.0
3,680,558	+		BT2927	0.87	+0.2
3,680,564	+		BT2927	0.88	+0.2
3,680,564	+				-0.8
3,680,564	+		BT2927	0.88	+0.2
3,680,564	+		BT2927	0.88	-1.1
3,680,565	-		BT2927	0.88	-0.5
3,680,565	-		BT2927	0.88	-0.8
3,680,654	+				+1.0
3,680,680	-				-2.0
3,680,685	+				+1.2
3,680,685	-				-3.3
3,680,688	+				-0.2
3,680,690	+				-2.1
3,680,690	+				-2.5
3,680,691	-				-2.1
3,680,737	+				-1.0
3,680,738	-				+0.2
3,680,772	-				-1.7
3,680,817	+				+0.2
3,680,830	-				-0.8
3,680,832	-				+1.2
3,680,849	+				+1.2
3,680,955	+				-0.7
3,680,982	+				-2.3
3,680,982	+				+1.6
3,680,983	-				+0.2
3,680,983	-				-1.3
3,680,993	+				-0.5
3,681,015	+				-0.9
3,681,020	+				-0.6
3,681,059	+				-0.9
3,681,065	+				-0.3
3,681,065	+				-2.3
3,681,066	-				+1.2
3,681,066	-				-0.8
3,681,068	+				+0.2
3,681,101	+				-0.8
3,681,101	+				-1.3
3,681,122	+				-0.2
3,681,123	-				-0.8
3,681,167	+				-1.6
3,681,167	+				+1.8
3,681,167	+				-0.8
3,681,167	+				-0.3
3,681,209	+				+0.2
3,681,213	+				-0.6
3,681,217	+				-0.2
3,681,232	+				-1.5
3,681,267	+				-1.2
3,681,267	+				-0.6
3,681,335	-		BT2928	0.11	+0.7
3,681,400	+		BT2928	0.13	-1.5
3,681,410	+		BT2928	0.13	-0.2
3,681,411	-		BT2928	0.13	-1.7
3,681,420	-		BT2928	0.13	-0.8
3,681,425	+		BT2928	0.13	-2.0
3,681,426	-		BT2928	0.14	-1.6
3,681,515	-		BT2928	0.16	-2.1
3,681,563	-		BT2928	0.18	-1.0
3,681,563	-		BT2928	0.18	-0.8
3,681,563	-		BT2928	0.18	+0.2
3,681,576	-		BT2928	0.18	-1.3
3,681,576	-		BT2928	0.18	-0.8
3,681,578	+		BT2928	0.18	+1.2
3,681,639	+		BT2928	0.20	+0.4
3,681,639	+		BT2928	0.20	+0.2
3,681,640	-		BT2928	0.20	+0.2
3,681,709	+		BT2928	0.22	-0.8
3,681,798	+		BT2928	0.25	-1.6
3,681,800	+		BT2928	0.25	-0.8
3,681,804	+		BT2928	0.25	-0.8
3,681,804	+		BT2928	0.25	+1.2
3,681,826	+		BT2928	0.25	-1.0
3,681,827	-		BT2928	0.25	-1.3
3,681,854	+		BT2928	0.26	-1.0
3,681,854	+		BT2928	0.26	-1.5
3,681,855	-		BT2928	0.26	-1.5
3,681,942	+		BT2928	0.29	-1.6
3,681,942	+		BT2928	0.29	-0.2
3,681,942	+		BT2928	0.29	-1.0
3,681,942	+		BT2928	0.29	+1.6
3,681,944	+		BT2928	0.29	+0.2
3,681,944	+		BT2928	0.29	-0.8
3,681,945	-		BT2928	0.29	-0.1
3,681,949	-		BT2928	0.29	-1.4