Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3212

Experiment: Dino_ML3_MIT diversity barseq

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dino_ML3_MIT diversity barseq
3,377,003	+				+0.1
3,377,003	+				+1.4
3,377,041	+				-0.0
3,377,041	+				+0.5
3,377,062	+				-0.2
3,377,069	-				-0.6
3,377,084	+				+0.2
3,377,092	-				+0.6
3,377,092	-				+1.6
3,377,092	-				+0.9
3,377,092	-				+0.6
3,377,094	+				-0.9
3,377,115	+				+0.3
3,377,115	+				+1.0
3,377,122	-				-0.9
3,377,123	-				-0.4
3,377,182	+				-0.5
3,377,212	-				+0.0
3,377,224	+				-0.3
3,377,257	+				+0.2
3,377,339	+				-0.2
3,377,339	+				+0.4
3,377,364	+				+0.8
3,377,369	+				+0.3
3,377,416	-				-0.8
3,377,550	+		Dshi_3211	0.29	+0.5
3,377,576	+		Dshi_3211	0.33	+0.2
3,377,584	-		Dshi_3211	0.34	-0.3
3,377,601	+		Dshi_3211	0.37	-2.6
3,377,601	+		Dshi_3211	0.37	-0.6
3,377,609	-		Dshi_3211	0.38	+1.1
3,377,609	-		Dshi_3211	0.38	+0.6
3,377,609	-		Dshi_3211	0.38	+0.3
3,377,636	+		Dshi_3211	0.42	+0.7
3,377,642	+		Dshi_3211	0.43	-0.0
3,377,644	-		Dshi_3211	0.44	+0.5
3,377,650	+		Dshi_3211	0.45	-0.2
3,377,657	-		Dshi_3211	0.46	-2.0
3,377,657	-		Dshi_3211	0.46	-0.3
3,377,674	-		Dshi_3211	0.48	+0.3
3,377,711	+		Dshi_3211	0.54	-1.3
3,377,793	+		Dshi_3211	0.68	-0.4
3,377,816	-		Dshi_3211	0.71	-0.8
3,377,816	-		Dshi_3211	0.71	+0.9
3,377,824	+		Dshi_3211	0.73	-0.6
3,377,918	+		Dshi_3211	0.88	-0.4
3,377,973	+				-0.2
3,378,097	-				-0.3
3,378,157	+		Dshi_3212	0.14	-0.6
3,378,160	-		Dshi_3212	0.14	-0.0
3,378,198	-		Dshi_3212	0.17	-0.3
3,378,260	-		Dshi_3212	0.22	-0.7
3,378,297	+		Dshi_3212	0.25	-0.4
3,378,297	-		Dshi_3212	0.25	-0.7
3,378,302	+		Dshi_3212	0.25	-0.3
3,378,305	-		Dshi_3212	0.26	+1.1
3,378,305	-		Dshi_3212	0.26	-0.2
3,378,316	+		Dshi_3212	0.26	+1.4
3,378,319	-		Dshi_3212	0.27	-1.1
3,378,339	+		Dshi_3212	0.28	-0.3
3,378,339	+		Dshi_3212	0.28	+1.2
3,378,405	+		Dshi_3212	0.33	+0.6
3,378,412	-		Dshi_3212	0.34	-2.1
3,378,422	+		Dshi_3212	0.35	-0.5
3,378,479	+		Dshi_3212	0.39	-1.3
3,378,526	+		Dshi_3212	0.43	+0.1
3,378,526	+		Dshi_3212	0.43	+0.2
3,378,526	+		Dshi_3212	0.43	+0.5
3,378,527	-		Dshi_3212	0.43	-0.3
3,378,529	-		Dshi_3212	0.43	-0.1
3,378,529	-		Dshi_3212	0.43	+0.7
3,378,534	-		Dshi_3212	0.44	-0.1
3,378,534	-		Dshi_3212	0.44	-0.7
3,378,576	-		Dshi_3212	0.47	+0.4
3,378,605	+		Dshi_3212	0.49	-1.1
3,378,615	+		Dshi_3212	0.50	+0.6
3,378,632	-		Dshi_3212	0.51	+0.2
3,378,666	+		Dshi_3212	0.54	-1.5
3,378,669	-		Dshi_3212	0.54	+0.6
3,378,684	+		Dshi_3212	0.55	-0.0
3,378,703	+		Dshi_3212	0.57	-0.7
3,378,734	-		Dshi_3212	0.59	+0.5
3,378,746	-		Dshi_3212	0.60	+1.0
3,378,753	+		Dshi_3212	0.61	+0.7
3,378,756	-		Dshi_3212	0.61	-0.5
3,378,793	-		Dshi_3212	0.64	+0.1
3,378,817	-		Dshi_3212	0.66	+0.2
3,378,847	+		Dshi_3212	0.68	-1.4
3,378,869	+		Dshi_3212	0.70	-0.3
3,378,869	+		Dshi_3212	0.70	+0.4
3,378,875	-		Dshi_3212	0.70	-0.2
3,378,889	+		Dshi_3212	0.71	-0.2
3,378,889	+		Dshi_3212	0.71	+0.6
3,378,889	+		Dshi_3212	0.71	+1.6
3,378,894	+		Dshi_3212	0.72	+0.1
3,378,897	-		Dshi_3212	0.72	-0.1
3,378,922	+		Dshi_3212	0.74	+0.0
3,378,961	+		Dshi_3212	0.77	-0.7
3,378,991	-		Dshi_3212	0.79	+0.5
3,378,991	-		Dshi_3212	0.79	-0.4
3,379,042	+		Dshi_3212	0.83	+0.2
3,379,058	-		Dshi_3212	0.85	-0.3
3,379,105	-		Dshi_3212	0.88	-0.1
3,379,105	-		Dshi_3212	0.88	-0.5
3,379,139	-				+0.2
3,379,144	-				+0.1
3,379,164	-				+1.9
3,379,166	+				-0.7
3,379,166	+				-0.2
3,379,166	+				+0.0
3,379,174	-				+0.7
3,379,175	-				+0.0
3,379,211	+				+0.2
3,379,211	+				+0.6
3,379,211	+				-0.4
3,379,219	-				+0.3
3,379,219	-				+1.1
3,379,219	-				+0.6
3,379,234	+				+1.0
3,379,242	-				-0.1
3,379,360	+				+0.6
3,379,368	-				+0.1
3,379,369	-				-0.1
3,379,372	+				+0.4
3,379,372	+				-0.5
3,379,380	-				+0.4
3,379,380	-				+0.4
3,379,383	+				-0.1
3,379,383	+				-2.3
3,379,383	+				-0.8
3,379,383	+				+0.1
3,379,385	-				+0.3
3,379,387	+				+0.0
3,379,387	+				+0.7
3,379,387	+				-0.1
3,379,387	+				+2.3
3,379,391	-				-1.4
3,379,391	-				+0.2
3,379,391	-				+0.2
3,379,391	-				+0.3
3,379,391	-				-0.3
3,379,391	-				-0.0
3,379,391	-				+0.6
3,379,391	-				-0.2
3,379,393	+				-0.2
3,379,393	+				+1.0
3,379,397	+				-0.2
3,379,398	+				+0.1
3,379,398	+				+0.1
3,379,398	+				+0.4
3,379,401	-				+0.9
3,379,401	-				-0.2
3,379,406	-				+0.8
3,379,406	-				+0.3
3,379,421	+				-0.3
3,379,428	-				+0.4
3,379,460	+				+0.7
3,379,460	+				-0.1
3,379,468	-				-0.6
3,379,468	-				+0.2
3,379,483	-				-0.6
3,379,486	+				-1.9
3,379,516	+				-0.0
3,379,522	-				-0.8
3,379,527	-				+0.6
3,379,529	+				+0.4
3,379,529	+				+0.5
3,379,565	+				+0.4
3,379,584	+				+2.6
3,379,592	-				+0.5
3,379,593	-				-2.1
3,379,607	+				+0.3
3,379,608	+				-0.1
3,379,629	+				+0.9
3,379,669	-				-0.4
3,379,698	+				-0.6
3,379,776	+				-0.3
3,379,776	+				-0.4
3,379,784	-				-0.3
3,379,806	+				-1.4
3,379,819	-				+0.9
3,379,831	+				-0.2
3,379,831	+				+1.0
3,379,839	-				+0.5
3,379,839	-				-0.1
3,379,839	-				+0.9
3,379,839	-				+0.3
3,379,839	-				-0.2
3,379,839	-				-0.4
3,379,839	-				-0.1
3,379,839	-				+0.2
3,379,839	-				-2.0
3,379,839	-				+0.1
3,379,855	-				-1.2
3,379,872	-				+0.6
3,379,873	-				-0.2
3,379,873	-				-0.6
3,379,873	-				-0.2
3,379,881	+				+0.3
3,379,881	+				-0.3
3,379,889	-				-0.6
3,379,889	-				+0.5
3,379,894	-				+1.9
3,379,909	+				-0.3
3,379,922	+				+0.3
3,379,929	+				-0.0
3,379,945	+				+0.1
3,379,962	+				-0.8
3,379,970	-				-0.1
3,379,970	-				+0.5
3,379,976	+				-0.8
3,380,014	-		Dshi_3213	0.12	-1.1
3,380,014	-		Dshi_3213	0.12	-0.1
3,380,020	+		Dshi_3213	0.13	+0.1
3,380,021	+		Dshi_3213	0.13	-0.1
3,380,028	-		Dshi_3213	0.13	+0.2
3,380,054	+		Dshi_3213	0.15	-1.3
3,380,066	+		Dshi_3213	0.16	+0.6
3,380,075	+		Dshi_3213	0.17	+0.5
3,380,084	-		Dshi_3213	0.18	-0.5
3,380,084	-		Dshi_3213	0.18	-0.3
3,380,084	-		Dshi_3213	0.18	+0.1
3,380,128	-		Dshi_3213	0.22	+0.6
3,380,177	+		Dshi_3213	0.26	+1.0
3,380,181	-		Dshi_3213	0.26	+0.0
3,380,197	+		Dshi_3213	0.28	-0.1
3,380,197	+		Dshi_3213	0.28	-0.3
3,380,208	+		Dshi_3213	0.29	-0.6
3,380,216	-		Dshi_3213	0.29	+0.1
3,380,216	-		Dshi_3213	0.29	+0.0
3,380,251	-		Dshi_3213	0.32	+0.6