Experiment: Formate/Acetate-Sulfite (30/30-20 mM)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0215 and DVU0216 are separated by 1 nucleotides DVU0216 and DVU0217 are separated by 1 nucleotides DVU0217 and DVU0218 are separated by 8 nucleotides
DVU0215: DVU0215 - tail protein, putative (TIGR), at 255,790 to 256,923
DVU0215
DVU0216: DVU0216 - phage baseplate assembly protein V, putative (TIGR), at 256,925 to 257,563
DVU0216
DVU0217: DVU0217 - tail protein, putative (TIGR), at 257,565 to 258,041
DVU0217
DVU0218: DVU0218 - tail protein, putative (TIGR), at 258,050 to 259,111
DVU0218
Position (kb) 256
257
258 Strain fitness (log2 ratio) -2
-1
0
1 at 255.932 kb on - strand, within DVU0215 at 256.100 kb on + strand, within DVU0215 at 256.105 kb on + strand, within DVU0215 at 256.167 kb on - strand, within DVU0215 at 256.173 kb on - strand, within DVU0215 at 256.180 kb on - strand, within DVU0215 at 256.287 kb on + strand, within DVU0215 at 256.337 kb on + strand, within DVU0215 at 256.376 kb on - strand, within DVU0215 at 256.851 kb on + strand at 256.871 kb on - strand at 257.185 kb on + strand, within DVU0216 at 257.230 kb on + strand, within DVU0216 at 257.230 kb on + strand, within DVU0216 at 257.236 kb on - strand, within DVU0216 at 257.357 kb on + strand, within DVU0216 at 257.374 kb on - strand, within DVU0216 at 257.386 kb on + strand, within DVU0216 at 257.411 kb on - strand, within DVU0216 at 257.605 kb on + strand at 257.663 kb on - strand, within DVU0217 at 257.668 kb on - strand, within DVU0217 at 257.673 kb on - strand, within DVU0217 at 257.905 kb on + strand, within DVU0217 at 257.905 kb on + strand, within DVU0217 at 257.905 kb on + strand, within DVU0217 at 257.905 kb on + strand, within DVU0217 at 257.906 kb on - strand, within DVU0217 at 257.913 kb on - strand, within DVU0217 at 257.927 kb on + strand, within DVU0217 at 258.082 kb on + strand at 258.221 kb on + strand, within DVU0218 at 258.274 kb on + strand, within DVU0218 at 258.282 kb on - strand, within DVU0218 at 258.282 kb on - strand, within DVU0218 at 258.282 kb on - strand, within DVU0218
Per-strain Table
Position Strand Gene LocusTag Fraction Formate/Acetate-Sulfite (30/30-20 mM) remove 255,932 - DVU0215 0.13 -0.1 256,100 + DVU0215 0.27 -0.1 256,105 + DVU0215 0.28 -0.3 256,167 - DVU0215 0.33 -1.9 256,173 - DVU0215 0.34 +0.2 256,180 - DVU0215 0.34 -0.3 256,287 + DVU0215 0.44 -0.3 256,337 + DVU0215 0.48 -0.5 256,376 - DVU0215 0.52 +1.2 256,851 + -0.1 256,871 - -0.1 257,185 + DVU0216 0.41 -0.8 257,230 + DVU0216 0.48 -0.5 257,230 + DVU0216 0.48 +0.5 257,236 - DVU0216 0.49 -0.6 257,357 + DVU0216 0.68 -0.5 257,374 - DVU0216 0.70 +0.0 257,386 + DVU0216 0.72 +0.2 257,411 - DVU0216 0.76 -0.2 257,605 + -0.3 257,663 - DVU0217 0.21 -0.7 257,668 - DVU0217 0.22 -0.1 257,673 - DVU0217 0.23 -0.7 257,905 + DVU0217 0.71 -0.1 257,905 + DVU0217 0.71 -0.3 257,905 + DVU0217 0.71 -0.2 257,905 + DVU0217 0.71 +0.1 257,906 - DVU0217 0.71 +0.0 257,913 - DVU0217 0.73 -0.6 257,927 + DVU0217 0.76 -2.0 258,082 + -1.3 258,221 + DVU0218 0.16 -0.4 258,274 + DVU0218 0.21 +0.3 258,282 - DVU0218 0.22 -0.3 258,282 - DVU0218 0.22 -0.2 258,282 - DVU0218 0.22 -0.5
Or see this region's nucleotide sequence