Experiment: Ammonium chloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_464 and HP15_465 are separated by 55 nucleotides HP15_465 and HP15_466 are separated by 12 nucleotides HP15_466 and HP15_467 are separated by 90 nucleotides
HP15_464: HP15_464 - protein containing Patatin domain, at 470,549 to 471,790
_464
HP15_465: HP15_465 - heat shock protein HslVU, ATPase subunit HslU, at 471,846 to 473,174
_465
HP15_466: HP15_466 - ATP-dependent protease peptidase subunit, at 473,187 to 473,717
_466
HP15_467: HP15_467 - cell division protein, at 473,808 to 474,440
_467
Position (kb) 471
472
473
474 Strain fitness (log2 ratio) -1
0
1 at 470.851 kb on - strand, within HP15_464 at 471.007 kb on + strand, within HP15_464 at 471.009 kb on + strand, within HP15_464 at 471.020 kb on - strand, within HP15_464 at 471.238 kb on - strand, within HP15_464 at 471.238 kb on - strand, within HP15_464 at 471.256 kb on + strand, within HP15_464 at 471.390 kb on + strand, within HP15_464 at 471.587 kb on + strand, within HP15_464 at 471.813 kb on - strand at 471.861 kb on + strand at 471.920 kb on + strand at 472.082 kb on + strand, within HP15_465 at 472.184 kb on + strand, within HP15_465 at 472.234 kb on + strand, within HP15_465 at 472.234 kb on + strand, within HP15_465 at 472.234 kb on + strand, within HP15_465 at 472.837 kb on + strand, within HP15_465 at 473.002 kb on - strand, within HP15_465 at 473.052 kb on + strand at 473.215 kb on - strand at 473.215 kb on - strand at 473.215 kb on - strand at 473.356 kb on + strand, within HP15_466 at 473.437 kb on + strand, within HP15_466 at 473.438 kb on + strand, within HP15_466 at 473.480 kb on - strand, within HP15_466 at 473.502 kb on - strand, within HP15_466 at 473.800 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium chloride (N) remove 470,851 - HP15_464 0.24 +0.2 471,007 + HP15_464 0.37 -0.4 471,009 + HP15_464 0.37 +0.2 471,020 - HP15_464 0.38 +0.6 471,238 - HP15_464 0.55 +0.1 471,238 - HP15_464 0.55 -0.5 471,256 + HP15_464 0.57 +0.1 471,390 + HP15_464 0.68 +0.2 471,587 + HP15_464 0.84 +0.1 471,813 - -0.4 471,861 + -0.1 471,920 + +0.7 472,082 + HP15_465 0.18 +0.1 472,184 + HP15_465 0.25 -1.4 472,234 + HP15_465 0.29 -0.3 472,234 + HP15_465 0.29 -0.6 472,234 + HP15_465 0.29 -0.4 472,837 + HP15_465 0.75 -0.1 473,002 - HP15_465 0.87 -0.2 473,052 + +0.3 473,215 - -0.9 473,215 - +0.1 473,215 - -0.2 473,356 + HP15_466 0.32 +0.2 473,437 + HP15_466 0.47 +0.0 473,438 + HP15_466 0.47 -0.6 473,480 - HP15_466 0.55 +1.5 473,502 - HP15_466 0.59 +0.1 473,800 - +0.9
Or see this region's nucleotide sequence