Strain Fitness in Marinobacter adhaerens HP15 around HP15_2092

Experiment: Ammonium chloride (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2091 and HP15_2092 are separated by 211 nucleotidesHP15_2092 and HP15_2093 are separated by 53 nucleotides HP15_2091: HP15_2091 - transcriptional regulator, LysR family protein, at 2,189,219 to 2,190,253 _2091 HP15_2092: HP15_2092 - conserved hypothetical protein, at 2,190,465 to 2,191,232 _2092 HP15_2093: HP15_2093 - signal transduction histidine kinase, at 2,191,286 to 2,193,613 _2093 Position (kb) 2190 2191 2192Strain fitness (log2 ratio) -2 -1 0 1at 2189.592 kb on + strand, within HP15_2091at 2189.592 kb on + strand, within HP15_2091at 2189.592 kb on + strand, within HP15_2091at 2189.625 kb on - strand, within HP15_2091at 2189.692 kb on - strand, within HP15_2091at 2189.850 kb on - strand, within HP15_2091at 2189.850 kb on - strand, within HP15_2091at 2189.945 kb on + strand, within HP15_2091at 2189.967 kb on + strand, within HP15_2091at 2190.038 kb on + strand, within HP15_2091at 2190.081 kb on + strand, within HP15_2091at 2190.089 kb on - strand, within HP15_2091at 2190.089 kb on - strand, within HP15_2091at 2190.130 kb on + strand, within HP15_2091at 2190.138 kb on - strand, within HP15_2091at 2190.203 kb on + strandat 2190.206 kb on - strandat 2190.274 kb on + strandat 2190.602 kb on - strand, within HP15_2092at 2190.633 kb on + strand, within HP15_2092at 2190.660 kb on - strand, within HP15_2092at 2190.696 kb on + strand, within HP15_2092at 2190.733 kb on - strand, within HP15_2092at 2190.942 kb on + strand, within HP15_2092at 2191.022 kb on - strand, within HP15_2092at 2191.236 kb on - strandat 2191.314 kb on + strandat 2191.322 kb on - strandat 2191.379 kb on - strandat 2191.596 kb on + strand, within HP15_2093at 2191.599 kb on - strand, within HP15_2093at 2191.619 kb on - strand, within HP15_2093at 2191.671 kb on - strand, within HP15_2093at 2191.787 kb on + strand, within HP15_2093at 2191.788 kb on + strand, within HP15_2093at 2191.808 kb on - strand, within HP15_2093at 2191.897 kb on + strand, within HP15_2093at 2191.937 kb on + strand, within HP15_2093at 2192.048 kb on - strand, within HP15_2093at 2192.119 kb on + strand, within HP15_2093at 2192.119 kb on + strand, within HP15_2093at 2192.127 kb on - strand, within HP15_2093

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Per-strain Table

Position Strand Gene LocusTag Fraction Ammonium chloride (N)
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2,189,592 + HP15_2091 0.36 +0.1
2,189,592 + HP15_2091 0.36 -1.0
2,189,592 + HP15_2091 0.36 -0.1
2,189,625 - HP15_2091 0.39 -0.2
2,189,692 - HP15_2091 0.46 -0.7
2,189,850 - HP15_2091 0.61 +0.7
2,189,850 - HP15_2091 0.61 +0.1
2,189,945 + HP15_2091 0.70 +0.5
2,189,967 + HP15_2091 0.72 +0.5
2,190,038 + HP15_2091 0.79 -0.9
2,190,081 + HP15_2091 0.83 +0.3
2,190,089 - HP15_2091 0.84 -0.6
2,190,089 - HP15_2091 0.84 -0.5
2,190,130 + HP15_2091 0.88 +0.3
2,190,138 - HP15_2091 0.89 +0.8
2,190,203 + -1.1
2,190,206 - +0.2
2,190,274 + +0.1
2,190,602 - HP15_2092 0.18 +0.2
2,190,633 + HP15_2092 0.22 -1.1
2,190,660 - HP15_2092 0.25 -0.1
2,190,696 + HP15_2092 0.30 -0.9
2,190,733 - HP15_2092 0.35 -0.6
2,190,942 + HP15_2092 0.62 -2.0
2,191,022 - HP15_2092 0.73 -0.9
2,191,236 - +0.6
2,191,314 + -0.6
2,191,322 - +0.1
2,191,379 - -0.7
2,191,596 + HP15_2093 0.13 +0.2
2,191,599 - HP15_2093 0.13 -0.4
2,191,619 - HP15_2093 0.14 -0.1
2,191,671 - HP15_2093 0.17 +0.2
2,191,787 + HP15_2093 0.22 -0.3
2,191,788 + HP15_2093 0.22 +0.1
2,191,808 - HP15_2093 0.22 +0.5
2,191,897 + HP15_2093 0.26 -0.4
2,191,937 + HP15_2093 0.28 +0.3
2,192,048 - HP15_2093 0.33 -0.2
2,192,119 + HP15_2093 0.36 -1.4
2,192,119 + HP15_2093 0.36 -2.0
2,192,127 - HP15_2093 0.36 -0.3

Or see this region's nucleotide sequence