Experiment: RCH2_defined_glucose with MS_media 0.5x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21015 and BWI76_RS21020 are separated by 97 nucleotides BWI76_RS21020 and BWI76_RS21025 are separated by 155 nucleotides
BWI76_RS21015: BWI76_RS21015 - LysR family transcriptional regulator, at 4,396,695 to 4,397,582
_RS21015
BWI76_RS21020: BWI76_RS21020 - MFS transporter, at 4,397,680 to 4,398,876
_RS21020
BWI76_RS21025: BWI76_RS21025 - GMP synthase (glutamine-hydrolyzing), at 4,399,032 to 4,400,609
_RS21025
Position (kb) 4397
4398
4399 Strain fitness (log2 ratio) -1
0
1 at 4396.861 kb on + strand, within BWI76_RS21015 at 4396.864 kb on - strand, within BWI76_RS21015 at 4396.877 kb on - strand, within BWI76_RS21015 at 4396.908 kb on - strand, within BWI76_RS21015 at 4396.909 kb on - strand, within BWI76_RS21015 at 4396.917 kb on + strand, within BWI76_RS21015 at 4396.947 kb on - strand, within BWI76_RS21015 at 4397.468 kb on + strand, within BWI76_RS21015 at 4397.480 kb on - strand, within BWI76_RS21015 at 4397.627 kb on + strand at 4397.802 kb on - strand, within BWI76_RS21020 at 4397.844 kb on + strand, within BWI76_RS21020 at 4398.114 kb on + strand, within BWI76_RS21020 at 4398.155 kb on - strand, within BWI76_RS21020 at 4398.169 kb on + strand, within BWI76_RS21020 at 4398.197 kb on + strand, within BWI76_RS21020 at 4398.205 kb on - strand, within BWI76_RS21020 at 4398.216 kb on + strand, within BWI76_RS21020 at 4398.224 kb on - strand, within BWI76_RS21020 at 4398.224 kb on - strand, within BWI76_RS21020 at 4398.490 kb on - strand at 4398.505 kb on - strand, within BWI76_RS21020 at 4398.562 kb on - strand, within BWI76_RS21020 at 4398.562 kb on - strand, within BWI76_RS21020 at 4398.632 kb on - strand, within BWI76_RS21020
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with MS_media 0.5x remove 4,396,861 + BWI76_RS21015 0.19 -1.6 4,396,864 - BWI76_RS21015 0.19 -0.2 4,396,877 - BWI76_RS21015 0.20 -0.4 4,396,908 - BWI76_RS21015 0.24 +0.6 4,396,909 - BWI76_RS21015 0.24 -0.3 4,396,917 + BWI76_RS21015 0.25 -0.7 4,396,947 - BWI76_RS21015 0.28 -0.5 4,397,468 + BWI76_RS21015 0.87 +0.6 4,397,480 - BWI76_RS21015 0.88 -0.1 4,397,627 + -1.1 4,397,802 - BWI76_RS21020 0.10 +0.8 4,397,844 + BWI76_RS21020 0.14 -0.2 4,398,114 + BWI76_RS21020 0.36 +1.1 4,398,155 - BWI76_RS21020 0.40 +0.9 4,398,169 + BWI76_RS21020 0.41 -0.1 4,398,197 + BWI76_RS21020 0.43 +0.8 4,398,205 - BWI76_RS21020 0.44 -0.2 4,398,216 + BWI76_RS21020 0.45 -0.0 4,398,224 - BWI76_RS21020 0.45 -0.2 4,398,224 - BWI76_RS21020 0.45 +0.5 4,398,490 - -0.9 4,398,505 - BWI76_RS21020 0.69 -0.0 4,398,562 - BWI76_RS21020 0.74 -0.4 4,398,562 - BWI76_RS21020 0.74 +0.6 4,398,632 - BWI76_RS21020 0.80 -0.4
Or see this region's nucleotide sequence