Experiment: RCH2_defined_glucose with MS_media 0.5x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13915 and BWI76_RS13920 are separated by 141 nucleotides BWI76_RS13920 and BWI76_RS13925 are separated by 261 nucleotides
BWI76_RS13915: BWI76_RS13915 - magnesium transport protein MgtC, at 2,903,346 to 2,904,029
_RS13915
BWI76_RS13920: BWI76_RS13920 - magnesium-translocating P-type ATPase, at 2,904,171 to 2,906,903
_RS13920
BWI76_RS13925: BWI76_RS13925 - catalase/peroxidase HPI, at 2,907,165 to 2,909,348
_RS13925
Position (kb)
2904
2905
2906
2907 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 2903.196 kb on + strand at 2903.204 kb on + strand at 2903.216 kb on - strand at 2903.346 kb on + strand at 2903.387 kb on + strand at 2903.410 kb on - strand at 2903.442 kb on - strand, within BWI76_RS13915 at 2903.442 kb on - strand, within BWI76_RS13915 at 2903.444 kb on + strand, within BWI76_RS13915 at 2903.444 kb on + strand, within BWI76_RS13915 at 2903.459 kb on + strand, within BWI76_RS13915 at 2903.492 kb on - strand, within BWI76_RS13915 at 2903.524 kb on + strand at 2903.529 kb on - strand, within BWI76_RS13915 at 2903.561 kb on - strand, within BWI76_RS13915 at 2903.586 kb on + strand, within BWI76_RS13915 at 2903.632 kb on - strand, within BWI76_RS13915 at 2903.664 kb on - strand, within BWI76_RS13915 at 2903.664 kb on - strand, within BWI76_RS13915 at 2903.664 kb on - strand, within BWI76_RS13915 at 2903.664 kb on - strand, within BWI76_RS13915 at 2903.674 kb on - strand, within BWI76_RS13915 at 2903.674 kb on - strand, within BWI76_RS13915 at 2903.674 kb on - strand, within BWI76_RS13915 at 2903.674 kb on - strand, within BWI76_RS13915 at 2903.784 kb on - strand, within BWI76_RS13915 at 2903.832 kb on - strand, within BWI76_RS13915 at 2903.857 kb on + strand, within BWI76_RS13915 at 2903.858 kb on - strand, within BWI76_RS13915 at 2903.895 kb on + strand, within BWI76_RS13915 at 2903.895 kb on + strand, within BWI76_RS13915 at 2903.895 kb on + strand, within BWI76_RS13915 at 2903.927 kb on + strand at 2903.927 kb on + strand, within BWI76_RS13915 at 2903.927 kb on + strand, within BWI76_RS13915 at 2903.952 kb on + strand, within BWI76_RS13915 at 2904.010 kb on + strand at 2904.018 kb on - strand at 2904.023 kb on + strand at 2904.023 kb on + strand at 2904.023 kb on + strand at 2904.023 kb on + strand at 2904.023 kb on + strand at 2904.023 kb on + strand at 2904.023 kb on + strand at 2904.031 kb on - strand at 2904.033 kb on - strand at 2904.053 kb on + strand at 2904.093 kb on + strand at 2904.101 kb on - strand at 2904.231 kb on - strand at 2904.264 kb on + strand at 2904.274 kb on + strand at 2904.288 kb on - strand at 2904.296 kb on + strand at 2904.296 kb on + strand at 2904.304 kb on - strand at 2904.330 kb on - strand at 2904.334 kb on + strand at 2904.334 kb on + strand at 2904.356 kb on - strand at 2904.368 kb on + strand at 2904.433 kb on + strand at 2904.475 kb on + strand, within BWI76_RS13920 at 2904.625 kb on + strand, within BWI76_RS13920 at 2904.969 kb on + strand, within BWI76_RS13920 at 2904.994 kb on - strand, within BWI76_RS13920 at 2905.184 kb on + strand, within BWI76_RS13920 at 2905.215 kb on - strand, within BWI76_RS13920 at 2905.275 kb on + strand, within BWI76_RS13920 at 2905.357 kb on + strand, within BWI76_RS13920 at 2905.724 kb on - strand, within BWI76_RS13920 at 2905.912 kb on + strand, within BWI76_RS13920 at 2905.950 kb on - strand, within BWI76_RS13920 at 2906.322 kb on - strand, within BWI76_RS13920 at 2906.606 kb on + strand, within BWI76_RS13920 at 2907.013 kb on + strand at 2907.707 kb on - strand, within BWI76_RS13925 at 2907.808 kb on - strand, within BWI76_RS13925
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with MS_media 0.5x remove 2,903,196 + -2.5 2,903,204 + -1.5 2,903,216 - -2.0 2,903,346 + -0.3 2,903,387 + -2.1 2,903,410 - -1.0 2,903,442 - BWI76_RS13915 0.14 -2.5 2,903,442 - BWI76_RS13915 0.14 -0.2 2,903,444 + BWI76_RS13915 0.14 +1.5 2,903,444 + BWI76_RS13915 0.14 -2.9 2,903,459 + BWI76_RS13915 0.17 -1.3 2,903,492 - BWI76_RS13915 0.21 -1.2 2,903,524 + -1.3 2,903,529 - BWI76_RS13915 0.27 -3.1 2,903,561 - BWI76_RS13915 0.31 -3.9 2,903,586 + BWI76_RS13915 0.35 -0.9 2,903,632 - BWI76_RS13915 0.42 -2.0 2,903,664 - BWI76_RS13915 0.46 -4.3 2,903,664 - BWI76_RS13915 0.46 -3.8 2,903,664 - BWI76_RS13915 0.46 -4.1 2,903,664 - BWI76_RS13915 0.46 -3.2 2,903,674 - BWI76_RS13915 0.48 -3.1 2,903,674 - BWI76_RS13915 0.48 -2.6 2,903,674 - BWI76_RS13915 0.48 -2.0 2,903,674 - BWI76_RS13915 0.48 +0.7 2,903,784 - BWI76_RS13915 0.64 -0.4 2,903,832 - BWI76_RS13915 0.71 -0.7 2,903,857 + BWI76_RS13915 0.75 -0.9 2,903,858 - BWI76_RS13915 0.75 -1.7 2,903,895 + BWI76_RS13915 0.80 -1.1 2,903,895 + BWI76_RS13915 0.80 +0.2 2,903,895 + BWI76_RS13915 0.80 -1.3 2,903,927 + -0.5 2,903,927 + BWI76_RS13915 0.85 -0.7 2,903,927 + BWI76_RS13915 0.85 -0.4 2,903,952 + BWI76_RS13915 0.89 -0.7 2,904,010 + +0.1 2,904,018 - -1.9 2,904,023 + -0.8 2,904,023 + +0.4 2,904,023 + -0.1 2,904,023 + -0.1 2,904,023 + -0.6 2,904,023 + +0.2 2,904,023 + -0.8 2,904,031 - -2.3 2,904,033 - -2.0 2,904,053 + -0.4 2,904,093 + -3.0 2,904,101 - -1.3 2,904,231 - -1.1 2,904,264 + -5.0 2,904,274 + -3.6 2,904,288 - -3.9 2,904,296 + -3.6 2,904,296 + -6.0 2,904,304 - -1.3 2,904,330 - -2.1 2,904,334 + -3.0 2,904,334 + -1.8 2,904,356 - -2.8 2,904,368 + -3.5 2,904,433 + -4.8 2,904,475 + BWI76_RS13920 0.11 -1.4 2,904,625 + BWI76_RS13920 0.17 -1.3 2,904,969 + BWI76_RS13920 0.29 -3.8 2,904,994 - BWI76_RS13920 0.30 -3.8 2,905,184 + BWI76_RS13920 0.37 -4.1 2,905,215 - BWI76_RS13920 0.38 -3.5 2,905,275 + BWI76_RS13920 0.40 -2.0 2,905,357 + BWI76_RS13920 0.43 -3.5 2,905,724 - BWI76_RS13920 0.57 -4.9 2,905,912 + BWI76_RS13920 0.64 -4.5 2,905,950 - BWI76_RS13920 0.65 -6.0 2,906,322 - BWI76_RS13920 0.79 -0.9 2,906,606 + BWI76_RS13920 0.89 -2.7 2,907,013 + -0.4 2,907,707 - BWI76_RS13925 0.25 -0.6 2,907,808 - BWI76_RS13925 0.29 -0.9
Or see this region's nucleotide sequence