Experiment: RCH2_defined_glucose with MS_media 0.5x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11630 and BWI76_RS11635 are separated by 78 nucleotides BWI76_RS11635 and BWI76_RS11640 overlap by 1 nucleotides BWI76_RS11640 and BWI76_RS11645 overlap by 28 nucleotides
BWI76_RS11630: BWI76_RS11630 - sulfurtransferase, at 2,446,833 to 2,448,140
_RS11630
BWI76_RS11635: BWI76_RS11635 - ABC transporter, at 2,448,219 to 2,448,851
_RS11635
BWI76_RS11640: BWI76_RS11640 - ABC transporter membrane protein, at 2,448,851 to 2,450,386
_RS11640
BWI76_RS11645: BWI76_RS11645 - ABC transporter substrate-binding protein, at 2,450,359 to 2,451,519
_RS11645
Position (kb)
2448
2449
2450
2451 Strain fitness (log2 ratio)
-1
0
1 at 2447.864 kb on - strand, within BWI76_RS11630 at 2447.902 kb on - strand, within BWI76_RS11630 at 2448.372 kb on - strand, within BWI76_RS11635 at 2448.574 kb on + strand, within BWI76_RS11635 at 2448.798 kb on + strand at 2448.862 kb on - strand at 2448.929 kb on - strand at 2448.964 kb on - strand at 2449.006 kb on - strand, within BWI76_RS11640 at 2449.235 kb on - strand, within BWI76_RS11640 at 2449.978 kb on + strand, within BWI76_RS11640 at 2449.986 kb on - strand, within BWI76_RS11640 at 2450.218 kb on - strand, within BWI76_RS11640 at 2450.364 kb on - strand at 2450.459 kb on - strand at 2450.526 kb on - strand, within BWI76_RS11645 at 2450.721 kb on + strand, within BWI76_RS11645 at 2450.729 kb on + strand, within BWI76_RS11645
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with MS_media 0.5x remove 2,447,864 - BWI76_RS11630 0.79 +0.2 2,447,902 - BWI76_RS11630 0.82 -0.4 2,448,372 - BWI76_RS11635 0.24 +0.1 2,448,574 + BWI76_RS11635 0.56 +0.2 2,448,798 + -1.1 2,448,862 - -0.1 2,448,929 - -0.1 2,448,964 - -0.1 2,449,006 - BWI76_RS11640 0.10 +0.1 2,449,235 - BWI76_RS11640 0.25 +0.1 2,449,978 + BWI76_RS11640 0.73 +0.0 2,449,986 - BWI76_RS11640 0.74 +0.8 2,450,218 - BWI76_RS11640 0.89 -0.0 2,450,364 - -0.2 2,450,459 - -1.1 2,450,526 - BWI76_RS11645 0.14 -0.2 2,450,721 + BWI76_RS11645 0.31 -0.3 2,450,729 + BWI76_RS11645 0.32 -0.2
Or see this region's nucleotide sequence