Experiment: RCH2_defined_glucose with MS_media 0.5x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11450 and BWI76_RS11455 are separated by 100 nucleotides BWI76_RS11455 and BWI76_RS11460 overlap by 17 nucleotides BWI76_RS11460 and BWI76_RS11465 are separated by 152 nucleotides
BWI76_RS11450: BWI76_RS11450 - cyanate MFS transporter, at 2,409,682 to 2,410,866
_RS11450
BWI76_RS11455: BWI76_RS11455 - AraC family transcriptional regulator, at 2,410,967 to 2,411,758
_RS11455
BWI76_RS11460: BWI76_RS11460 - DUF441 family protein, at 2,411,742 to 2,412,188
_RS11460
BWI76_RS11465: BWI76_RS11465 - hypothetical protein, at 2,412,341 to 2,412,841
_RS11465
Position (kb)
2410
2411
2412 Strain fitness (log2 ratio)
-1
0
1 at 2410.009 kb on + strand, within BWI76_RS11450 at 2410.017 kb on - strand, within BWI76_RS11450 at 2410.579 kb on + strand, within BWI76_RS11450 at 2410.592 kb on - strand, within BWI76_RS11450 at 2410.592 kb on - strand, within BWI76_RS11450 at 2410.623 kb on + strand, within BWI76_RS11450 at 2410.726 kb on + strand, within BWI76_RS11450 at 2410.837 kb on + strand at 2411.331 kb on + strand, within BWI76_RS11455 at 2411.569 kb on - strand, within BWI76_RS11455 at 2411.656 kb on - strand, within BWI76_RS11455 at 2411.861 kb on + strand, within BWI76_RS11460 at 2412.074 kb on + strand, within BWI76_RS11460 at 2412.164 kb on - strand at 2412.181 kb on - strand at 2412.197 kb on - strand at 2412.197 kb on - strand at 2412.367 kb on + strand at 2412.558 kb on + strand, within BWI76_RS11465 at 2412.680 kb on + strand, within BWI76_RS11465 at 2412.696 kb on + strand, within BWI76_RS11465
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with MS_media 0.5x remove 2,410,009 + BWI76_RS11450 0.28 -0.7 2,410,017 - BWI76_RS11450 0.28 -0.3 2,410,579 + BWI76_RS11450 0.76 -0.1 2,410,592 - BWI76_RS11450 0.77 +0.1 2,410,592 - BWI76_RS11450 0.77 -0.0 2,410,623 + BWI76_RS11450 0.79 +0.1 2,410,726 + BWI76_RS11450 0.88 -0.3 2,410,837 + -0.5 2,411,331 + BWI76_RS11455 0.46 +0.1 2,411,569 - BWI76_RS11455 0.76 +0.7 2,411,656 - BWI76_RS11455 0.87 +0.0 2,411,861 + BWI76_RS11460 0.27 -0.1 2,412,074 + BWI76_RS11460 0.74 -0.1 2,412,164 - -0.2 2,412,181 - -0.1 2,412,197 - +0.6 2,412,197 - -0.7 2,412,367 + -0.8 2,412,558 + BWI76_RS11465 0.43 -0.0 2,412,680 + BWI76_RS11465 0.68 -0.1 2,412,696 + BWI76_RS11465 0.71 -0.1
Or see this region's nucleotide sequence