Experiment: RCH2_defined_glucose with MS_media 0.5x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10810 and BWI76_RS10815 are separated by 273 nucleotides BWI76_RS10815 and BWI76_RS10820 are separated by 52 nucleotides
BWI76_RS10810: BWI76_RS10810 - NupC family nucleoside transporter, at 2,283,955 to 2,285,139
_RS10810
BWI76_RS10815: BWI76_RS10815 - iron permease, at 2,285,413 to 2,286,243
_RS10815
BWI76_RS10820: BWI76_RS10820 - iron uptake system protein EfeO, at 2,286,296 to 2,287,423
_RS10820
Position (kb)
2285
2286
2287 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2284.421 kb on - strand, within BWI76_RS10810 at 2284.450 kb on - strand, within BWI76_RS10810 at 2284.476 kb on + strand, within BWI76_RS10810 at 2284.481 kb on + strand, within BWI76_RS10810 at 2284.481 kb on - strand, within BWI76_RS10810 at 2284.484 kb on - strand, within BWI76_RS10810 at 2284.484 kb on - strand, within BWI76_RS10810 at 2284.486 kb on + strand, within BWI76_RS10810 at 2284.494 kb on - strand, within BWI76_RS10810 at 2284.494 kb on - strand, within BWI76_RS10810 at 2284.494 kb on - strand, within BWI76_RS10810 at 2284.494 kb on - strand, within BWI76_RS10810 at 2284.494 kb on - strand, within BWI76_RS10810 at 2284.494 kb on - strand, within BWI76_RS10810 at 2284.518 kb on + strand, within BWI76_RS10810 at 2284.526 kb on + strand at 2284.526 kb on - strand, within BWI76_RS10810 at 2284.590 kb on - strand, within BWI76_RS10810 at 2284.671 kb on + strand, within BWI76_RS10810 at 2284.693 kb on - strand, within BWI76_RS10810 at 2284.737 kb on - strand, within BWI76_RS10810 at 2284.751 kb on + strand, within BWI76_RS10810 at 2284.751 kb on + strand, within BWI76_RS10810 at 2284.751 kb on + strand, within BWI76_RS10810 at 2284.751 kb on + strand, within BWI76_RS10810 at 2284.758 kb on + strand, within BWI76_RS10810 at 2284.759 kb on - strand, within BWI76_RS10810 at 2284.759 kb on - strand, within BWI76_RS10810 at 2284.759 kb on - strand, within BWI76_RS10810 at 2284.759 kb on - strand, within BWI76_RS10810 at 2284.759 kb on - strand, within BWI76_RS10810 at 2284.759 kb on - strand, within BWI76_RS10810 at 2284.759 kb on - strand, within BWI76_RS10810 at 2284.759 kb on - strand, within BWI76_RS10810 at 2284.759 kb on - strand, within BWI76_RS10810 at 2284.772 kb on + strand, within BWI76_RS10810 at 2284.780 kb on - strand, within BWI76_RS10810 at 2284.780 kb on - strand, within BWI76_RS10810 at 2284.780 kb on - strand, within BWI76_RS10810 at 2284.780 kb on - strand, within BWI76_RS10810 at 2284.780 kb on - strand, within BWI76_RS10810 at 2284.810 kb on + strand, within BWI76_RS10810 at 2284.813 kb on - strand, within BWI76_RS10810 at 2284.818 kb on - strand, within BWI76_RS10810 at 2284.845 kb on - strand, within BWI76_RS10810 at 2284.884 kb on + strand, within BWI76_RS10810 at 2284.894 kb on + strand, within BWI76_RS10810 at 2285.017 kb on - strand, within BWI76_RS10810 at 2285.081 kb on + strand at 2285.091 kb on + strand at 2285.128 kb on + strand at 2285.130 kb on - strand at 2285.183 kb on - strand at 2285.188 kb on - strand at 2285.223 kb on + strand at 2285.231 kb on - strand at 2285.237 kb on + strand at 2285.237 kb on + strand at 2285.245 kb on - strand at 2285.245 kb on - strand at 2285.245 kb on - strand at 2285.245 kb on - strand at 2285.245 kb on - strand at 2285.566 kb on - strand, within BWI76_RS10815 at 2285.663 kb on + strand, within BWI76_RS10815 at 2285.812 kb on - strand, within BWI76_RS10815 at 2286.017 kb on + strand, within BWI76_RS10815 at 2286.228 kb on + strand at 2286.346 kb on + strand at 2286.677 kb on + strand, within BWI76_RS10820 at 2286.695 kb on - strand, within BWI76_RS10820 at 2286.761 kb on + strand, within BWI76_RS10820 at 2286.807 kb on - strand, within BWI76_RS10820
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with MS_media 0.5x remove 2,284,421 - BWI76_RS10810 0.39 +0.2 2,284,450 - BWI76_RS10810 0.42 -1.4 2,284,476 + BWI76_RS10810 0.44 -0.1 2,284,481 + BWI76_RS10810 0.44 -0.2 2,284,481 - BWI76_RS10810 0.44 -0.2 2,284,484 - BWI76_RS10810 0.45 -0.0 2,284,484 - BWI76_RS10810 0.45 -0.2 2,284,486 + BWI76_RS10810 0.45 -0.4 2,284,494 - BWI76_RS10810 0.45 +0.3 2,284,494 - BWI76_RS10810 0.45 +0.9 2,284,494 - BWI76_RS10810 0.45 +0.4 2,284,494 - BWI76_RS10810 0.45 -0.4 2,284,494 - BWI76_RS10810 0.45 +0.1 2,284,494 - BWI76_RS10810 0.45 -0.9 2,284,518 + BWI76_RS10810 0.48 -0.5 2,284,526 + +2.0 2,284,526 - BWI76_RS10810 0.48 -0.6 2,284,590 - BWI76_RS10810 0.54 +0.2 2,284,671 + BWI76_RS10810 0.60 +0.5 2,284,693 - BWI76_RS10810 0.62 -0.3 2,284,737 - BWI76_RS10810 0.66 -0.3 2,284,751 + BWI76_RS10810 0.67 -0.3 2,284,751 + BWI76_RS10810 0.67 -0.5 2,284,751 + BWI76_RS10810 0.67 -0.4 2,284,751 + BWI76_RS10810 0.67 -0.4 2,284,758 + BWI76_RS10810 0.68 +0.3 2,284,759 - BWI76_RS10810 0.68 +0.0 2,284,759 - BWI76_RS10810 0.68 +0.2 2,284,759 - BWI76_RS10810 0.68 -1.0 2,284,759 - BWI76_RS10810 0.68 +0.3 2,284,759 - BWI76_RS10810 0.68 -0.2 2,284,759 - BWI76_RS10810 0.68 +0.3 2,284,759 - BWI76_RS10810 0.68 -0.1 2,284,759 - BWI76_RS10810 0.68 -0.4 2,284,759 - BWI76_RS10810 0.68 -0.4 2,284,772 + BWI76_RS10810 0.69 -2.9 2,284,780 - BWI76_RS10810 0.70 -0.8 2,284,780 - BWI76_RS10810 0.70 -0.1 2,284,780 - BWI76_RS10810 0.70 +0.5 2,284,780 - BWI76_RS10810 0.70 +0.2 2,284,780 - BWI76_RS10810 0.70 +1.1 2,284,810 + BWI76_RS10810 0.72 -0.3 2,284,813 - BWI76_RS10810 0.72 -1.2 2,284,818 - BWI76_RS10810 0.73 -0.1 2,284,845 - BWI76_RS10810 0.75 +0.5 2,284,884 + BWI76_RS10810 0.78 -1.7 2,284,894 + BWI76_RS10810 0.79 +0.6 2,285,017 - BWI76_RS10810 0.90 -0.1 2,285,081 + +0.1 2,285,091 + +0.4 2,285,128 + -0.9 2,285,130 - -1.4 2,285,183 - +0.7 2,285,188 - -0.3 2,285,223 + -0.5 2,285,231 - +0.3 2,285,237 + +0.1 2,285,237 + -0.3 2,285,245 - -0.2 2,285,245 - -0.6 2,285,245 - -0.2 2,285,245 - -0.1 2,285,245 - -0.6 2,285,566 - BWI76_RS10815 0.18 -1.2 2,285,663 + BWI76_RS10815 0.30 -0.7 2,285,812 - BWI76_RS10815 0.48 -0.8 2,286,017 + BWI76_RS10815 0.73 -0.8 2,286,228 + -0.5 2,286,346 + -0.4 2,286,677 + BWI76_RS10820 0.34 -0.3 2,286,695 - BWI76_RS10820 0.35 -0.5 2,286,761 + BWI76_RS10820 0.41 +2.0 2,286,807 - BWI76_RS10820 0.45 -0.3
Or see this region's nucleotide sequence