Experiment: RCH2_defined_glucose with MS_media 0.5x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09500 and BWI76_RS09505 are separated by 173 nucleotides BWI76_RS09505 and BWI76_RS09510 overlap by 1 nucleotides BWI76_RS09510 and BWI76_RS09515 are separated by 6 nucleotides
BWI76_RS09500: BWI76_RS09500 - arginine ABC transporter substrate-binding protein, at 1,988,931 to 1,989,662
_RS09500
BWI76_RS09505: BWI76_RS09505 - arginine transporter permease subunit ArtM, at 1,989,836 to 1,990,504
_RS09505
BWI76_RS09510: BWI76_RS09510 - arginine transporter permease subunit ArtQ, at 1,990,504 to 1,991,220
_RS09510
BWI76_RS09515: BWI76_RS09515 - arginine ABC transporter substrate-binding protein, at 1,991,227 to 1,991,958
_RS09515
Position (kb) 1989
1990
1991 Strain fitness (log2 ratio) -1
0
1
2 at 1989.346 kb on + strand, within BWI76_RS09500 at 1989.354 kb on - strand at 1989.493 kb on + strand, within BWI76_RS09500 at 1990.229 kb on + strand, within BWI76_RS09505 at 1990.365 kb on + strand, within BWI76_RS09505 at 1990.365 kb on + strand, within BWI76_RS09505
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with MS_media 0.5x remove 1,989,346 + BWI76_RS09500 0.57 -0.5 1,989,354 - +2.2 1,989,493 + BWI76_RS09500 0.77 -0.1 1,990,229 + BWI76_RS09505 0.59 +0.1 1,990,365 + BWI76_RS09505 0.79 +1.5 1,990,365 + BWI76_RS09505 0.79 +0.1
Or see this region's nucleotide sequence