Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08840

Experiment: RCH2_defined_glucose with MS_media 0.5x

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS08825 and BWI76_RS08830 overlap by 8 nucleotidesBWI76_RS08830 and BWI76_RS08835 are separated by 1 nucleotidesBWI76_RS08835 and BWI76_RS08840 are separated by 44 nucleotidesBWI76_RS08840 and BWI76_RS08845 are separated by 190 nucleotides BWI76_RS08825: BWI76_RS08825 - cyclic pyranopterin monophosphate synthase MoaC, at 1,860,036 to 1,860,524 _RS08825 BWI76_RS08830: BWI76_RS08830 - molybdopterin synthase sulfur carrier subunit, at 1,860,517 to 1,860,765 _RS08830 BWI76_RS08835: BWI76_RS08835 - molybdopterin guanine dinucleotide biosynthesis protein MoaE, at 1,860,767 to 1,861,219 _RS08835 BWI76_RS08840: BWI76_RS08840 - hypothetical protein, at 1,861,264 to 1,861,968 _RS08840 BWI76_RS08845: BWI76_RS08845 - hypothetical protein, at 1,862,159 to 1,863,127 _RS08845 Position (kb) 1861 1862Strain fitness (log2 ratio) -1 0 1at 1860.268 kb on - strand, within BWI76_RS08825at 1860.425 kb on - strand, within BWI76_RS08825at 1860.563 kb on - strand, within BWI76_RS08830at 1860.768 kb on - strandat 1860.825 kb on - strand, within BWI76_RS08835at 1860.886 kb on + strand, within BWI76_RS08835at 1860.926 kb on - strand, within BWI76_RS08835at 1860.928 kb on - strand, within BWI76_RS08835at 1861.135 kb on + strand, within BWI76_RS08835at 1861.327 kb on + strandat 1861.355 kb on + strand, within BWI76_RS08840at 1861.769 kb on - strand, within BWI76_RS08840at 1862.127 kb on + strandat 1862.269 kb on - strand, within BWI76_RS08845at 1862.541 kb on - strand, within BWI76_RS08845at 1862.678 kb on - strand, within BWI76_RS08845at 1862.710 kb on + strand, within BWI76_RS08845at 1862.710 kb on + strand, within BWI76_RS08845at 1862.756 kb on + strand, within BWI76_RS08845at 1862.764 kb on - strand, within BWI76_RS08845at 1862.839 kb on + strand, within BWI76_RS08845at 1862.898 kb on - strand, within BWI76_RS08845at 1862.910 kb on + strand, within BWI76_RS08845at 1862.967 kb on + strand, within BWI76_RS08845at 1862.967 kb on + strand, within BWI76_RS08845

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Per-strain Table

Position Strand Gene LocusTag Fraction RCH2_defined_glucose with MS_media 0.5x
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1,860,268 - BWI76_RS08825 0.47 -0.4
1,860,425 - BWI76_RS08825 0.80 +0.1
1,860,563 - BWI76_RS08830 0.18 -1.6
1,860,768 - +0.1
1,860,825 - BWI76_RS08835 0.13 -0.5
1,860,886 + BWI76_RS08835 0.26 -0.9
1,860,926 - BWI76_RS08835 0.35 -0.4
1,860,928 - BWI76_RS08835 0.36 -0.3
1,861,135 + BWI76_RS08835 0.81 +0.0
1,861,327 + -0.9
1,861,355 + BWI76_RS08840 0.13 +0.8
1,861,769 - BWI76_RS08840 0.72 -0.1
1,862,127 + -0.3
1,862,269 - BWI76_RS08845 0.11 -0.3
1,862,541 - BWI76_RS08845 0.39 -0.5
1,862,678 - BWI76_RS08845 0.54 -0.0
1,862,710 + BWI76_RS08845 0.57 +0.8
1,862,710 + BWI76_RS08845 0.57 -0.5
1,862,756 + BWI76_RS08845 0.62 -0.4
1,862,764 - BWI76_RS08845 0.62 -0.0
1,862,839 + BWI76_RS08845 0.70 -0.7
1,862,898 - BWI76_RS08845 0.76 -0.2
1,862,910 + BWI76_RS08845 0.78 -0.1
1,862,967 + BWI76_RS08845 0.83 -1.6
1,862,967 + BWI76_RS08845 0.83 -0.5

Or see this region's nucleotide sequence