Experiment: RCH2_defined_glucose with MS_media 0.5x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07355 and BWI76_RS07360 are separated by 141 nucleotides BWI76_RS07360 and BWI76_RS07365 are separated by 153 nucleotides
BWI76_RS07355: BWI76_RS07355 - TonB-dependent siderophore receptor, at 1,549,980 to 1,552,169
_RS07355
BWI76_RS07360: BWI76_RS07360 - phenylalanine transporter, at 1,552,311 to 1,553,687
_RS07360
BWI76_RS07365: BWI76_RS07365 - MFS transporter, at 1,553,841 to 1,555,082
_RS07365
Position (kb)
1552
1553
1554 Strain fitness (log2 ratio)
-2
-1
0
1 at 1551.319 kb on + strand, within BWI76_RS07355 at 1551.672 kb on + strand, within BWI76_RS07355 at 1551.820 kb on + strand, within BWI76_RS07355 at 1551.869 kb on + strand, within BWI76_RS07355 at 1551.879 kb on + strand, within BWI76_RS07355 at 1551.887 kb on - strand, within BWI76_RS07355 at 1552.103 kb on + strand at 1552.268 kb on + strand at 1552.270 kb on - strand at 1552.294 kb on + strand at 1552.311 kb on - strand at 1552.335 kb on - strand at 1552.483 kb on + strand, within BWI76_RS07360 at 1552.538 kb on + strand, within BWI76_RS07360 at 1552.795 kb on + strand, within BWI76_RS07360 at 1552.805 kb on + strand, within BWI76_RS07360 at 1552.805 kb on + strand, within BWI76_RS07360 at 1553.106 kb on + strand, within BWI76_RS07360 at 1553.338 kb on - strand, within BWI76_RS07360 at 1553.460 kb on - strand, within BWI76_RS07360 at 1553.563 kb on + strand at 1553.660 kb on + strand at 1553.962 kb on + strand at 1554.123 kb on + strand, within BWI76_RS07365 at 1554.185 kb on - strand, within BWI76_RS07365 at 1554.190 kb on + strand, within BWI76_RS07365 at 1554.190 kb on + strand, within BWI76_RS07365 at 1554.190 kb on + strand, within BWI76_RS07365 at 1554.190 kb on + strand, within BWI76_RS07365 at 1554.198 kb on - strand, within BWI76_RS07365 at 1554.248 kb on - strand, within BWI76_RS07365 at 1554.251 kb on + strand at 1554.261 kb on + strand, within BWI76_RS07365 at 1554.472 kb on - strand, within BWI76_RS07365
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with MS_media 0.5x remove 1,551,319 + BWI76_RS07355 0.61 -0.1 1,551,672 + BWI76_RS07355 0.77 +0.0 1,551,820 + BWI76_RS07355 0.84 -1.2 1,551,869 + BWI76_RS07355 0.86 -0.2 1,551,879 + BWI76_RS07355 0.87 +0.6 1,551,887 - BWI76_RS07355 0.87 +0.5 1,552,103 + +0.1 1,552,268 + -1.8 1,552,270 - +0.2 1,552,294 + -0.1 1,552,311 - -0.1 1,552,335 - +0.3 1,552,483 + BWI76_RS07360 0.12 -0.0 1,552,538 + BWI76_RS07360 0.16 -0.1 1,552,795 + BWI76_RS07360 0.35 +0.1 1,552,805 + BWI76_RS07360 0.36 +0.7 1,552,805 + BWI76_RS07360 0.36 +0.3 1,553,106 + BWI76_RS07360 0.58 +0.5 1,553,338 - BWI76_RS07360 0.75 +0.1 1,553,460 - BWI76_RS07360 0.83 -0.1 1,553,563 + -0.1 1,553,660 + +0.4 1,553,962 + -0.0 1,554,123 + BWI76_RS07365 0.23 -0.1 1,554,185 - BWI76_RS07365 0.28 -0.8 1,554,190 + BWI76_RS07365 0.28 +0.2 1,554,190 + BWI76_RS07365 0.28 +0.0 1,554,190 + BWI76_RS07365 0.28 -0.2 1,554,190 + BWI76_RS07365 0.28 -0.7 1,554,198 - BWI76_RS07365 0.29 +0.2 1,554,248 - BWI76_RS07365 0.33 -0.1 1,554,251 + +1.1 1,554,261 + BWI76_RS07365 0.34 +0.2 1,554,472 - BWI76_RS07365 0.51 +0.0
Or see this region's nucleotide sequence