Experiment: RCH2_defined_glucose with MS_media 0.5x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06905 and BWI76_RS06910 are separated by 105 nucleotides BWI76_RS06910 and BWI76_RS06915 overlap by 4 nucleotides BWI76_RS06915 and BWI76_RS06920 overlap by 4 nucleotides
BWI76_RS06905: BWI76_RS06905 - Cu+ exporting ATPase, at 1,450,566 to 1,453,067
_RS06905
BWI76_RS06910: BWI76_RS06910 - transcriptional regulator, at 1,453,173 to 1,453,583
_RS06910
BWI76_RS06915: BWI76_RS06915 - membrane protein, at 1,453,580 to 1,454,044
_RS06915
BWI76_RS06920: BWI76_RS06920 - paraslipin, at 1,454,041 to 1,454,958
_RS06920
Position (kb) 1453
1454
1455 Strain fitness (log2 ratio) -1
0
1 at 1452.651 kb on - strand, within BWI76_RS06905 at 1452.793 kb on + strand, within BWI76_RS06905 at 1452.927 kb on + strand at 1452.961 kb on + strand at 1453.010 kb on + strand at 1453.043 kb on + strand at 1453.065 kb on - strand at 1453.410 kb on - strand, within BWI76_RS06910 at 1453.612 kb on + strand at 1453.629 kb on - strand at 1453.636 kb on + strand, within BWI76_RS06915 at 1453.644 kb on - strand, within BWI76_RS06915 at 1453.724 kb on - strand, within BWI76_RS06915 at 1453.839 kb on - strand, within BWI76_RS06915 at 1453.897 kb on - strand, within BWI76_RS06915 at 1454.033 kb on - strand at 1454.138 kb on + strand, within BWI76_RS06920 at 1454.138 kb on + strand, within BWI76_RS06920 at 1454.144 kb on - strand, within BWI76_RS06920 at 1454.146 kb on - strand, within BWI76_RS06920 at 1454.154 kb on - strand, within BWI76_RS06920 at 1454.434 kb on - strand, within BWI76_RS06920 at 1454.586 kb on + strand, within BWI76_RS06920 at 1454.594 kb on - strand, within BWI76_RS06920 at 1454.604 kb on - strand, within BWI76_RS06920 at 1454.604 kb on - strand, within BWI76_RS06920 at 1454.658 kb on + strand, within BWI76_RS06920 at 1454.666 kb on - strand, within BWI76_RS06920 at 1454.699 kb on - strand, within BWI76_RS06920 at 1454.821 kb on + strand, within BWI76_RS06920 at 1454.868 kb on - strand at 1454.868 kb on - strand at 1455.003 kb on - strand at 1455.008 kb on + strand at 1455.008 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with MS_media 0.5x remove 1,452,651 - BWI76_RS06905 0.83 -0.2 1,452,793 + BWI76_RS06905 0.89 +0.1 1,452,927 + -0.0 1,452,961 + -0.1 1,453,010 + -0.9 1,453,043 + +0.1 1,453,065 - +0.6 1,453,410 - BWI76_RS06910 0.58 -0.5 1,453,612 + -0.3 1,453,629 - +0.6 1,453,636 + BWI76_RS06915 0.12 +0.4 1,453,644 - BWI76_RS06915 0.14 -0.1 1,453,724 - BWI76_RS06915 0.31 +0.6 1,453,839 - BWI76_RS06915 0.56 -0.2 1,453,897 - BWI76_RS06915 0.68 +0.1 1,454,033 - +0.6 1,454,138 + BWI76_RS06920 0.11 -0.9 1,454,138 + BWI76_RS06920 0.11 -0.2 1,454,144 - BWI76_RS06920 0.11 +0.0 1,454,146 - BWI76_RS06920 0.11 -0.8 1,454,154 - BWI76_RS06920 0.12 -0.1 1,454,434 - BWI76_RS06920 0.43 -0.4 1,454,586 + BWI76_RS06920 0.59 +0.4 1,454,594 - BWI76_RS06920 0.60 +0.1 1,454,604 - BWI76_RS06920 0.61 +0.3 1,454,604 - BWI76_RS06920 0.61 -0.0 1,454,658 + BWI76_RS06920 0.67 -0.5 1,454,666 - BWI76_RS06920 0.68 -0.7 1,454,699 - BWI76_RS06920 0.72 +0.3 1,454,821 + BWI76_RS06920 0.85 -0.4 1,454,868 - -0.1 1,454,868 - -0.1 1,455,003 - -0.4 1,455,008 + -0.0 1,455,008 + -0.4
Or see this region's nucleotide sequence