Experiment: RCH2_defined_glucose with MS_media 0.5x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06320 and BWI76_RS06325 are separated by 64 nucleotides BWI76_RS06325 and BWI76_RS06330 are separated by 148 nucleotides BWI76_RS06330 and BWI76_RS06335 are separated by 45 nucleotides
BWI76_RS06320: BWI76_RS06320 - Xaa-Pro aminopeptidase, at 1,330,591 to 1,331,982
_RS06320
BWI76_RS06325: BWI76_RS06325 - hypothetical protein, at 1,332,047 to 1,332,424
_RS06325
BWI76_RS06330: BWI76_RS06330 - DNA-binding transcriptional regulator, at 1,332,573 to 1,333,262
_RS06330
BWI76_RS06335: BWI76_RS06335 - nucleoside-specific channel-forming protein Tsx, at 1,333,308 to 1,334,192
_RS06335
Position (kb) 1332
1333 Strain fitness (log2 ratio) -1
0
1 at 1331.238 kb on + strand, within BWI76_RS06320 at 1331.246 kb on + strand, within BWI76_RS06320 at 1331.734 kb on + strand, within BWI76_RS06320 at 1331.830 kb on - strand, within BWI76_RS06320 at 1331.994 kb on + strand at 1332.002 kb on - strand at 1332.004 kb on + strand at 1332.004 kb on + strand at 1332.012 kb on - strand at 1332.012 kb on - strand at 1332.064 kb on - strand at 1332.064 kb on - strand at 1332.083 kb on + strand at 1332.223 kb on + strand, within BWI76_RS06325 at 1332.231 kb on + strand, within BWI76_RS06325 at 1332.231 kb on - strand, within BWI76_RS06325 at 1332.762 kb on + strand, within BWI76_RS06330 at 1332.953 kb on + strand, within BWI76_RS06330 at 1333.131 kb on - strand, within BWI76_RS06330 at 1333.395 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with MS_media 0.5x remove 1,331,238 + BWI76_RS06320 0.46 -0.1 1,331,246 + BWI76_RS06320 0.47 +0.9 1,331,734 + BWI76_RS06320 0.82 +0.9 1,331,830 - BWI76_RS06320 0.89 -0.1 1,331,994 + -0.6 1,332,002 - -0.1 1,332,004 + -0.1 1,332,004 + -0.2 1,332,012 - -0.2 1,332,012 - -0.6 1,332,064 - +0.1 1,332,064 - -0.2 1,332,083 + -0.3 1,332,223 + BWI76_RS06325 0.47 +0.1 1,332,231 + BWI76_RS06325 0.49 +0.6 1,332,231 - BWI76_RS06325 0.49 +0.8 1,332,762 + BWI76_RS06330 0.27 -1.4 1,332,953 + BWI76_RS06330 0.55 +0.1 1,333,131 - BWI76_RS06330 0.81 -0.5 1,333,395 + +0.2
Or see this region's nucleotide sequence