Experiment: RCH2_defined_glucose with MS_media 0.5x
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01575 and BWI76_RS01580 are separated by 42 nucleotides BWI76_RS01580 and BWI76_RS01585 are separated by 186 nucleotides BWI76_RS01585 and BWI76_RS01590 are separated by 12 nucleotides BWI76_RS01590 and BWI76_RS01595 are separated by 12 nucleotides
BWI76_RS01575: BWI76_RS01575 - endonuclease V, at 320,653 to 321,324
_RS01575
BWI76_RS01580: BWI76_RS01580 - hypothetical protein, at 321,367 to 321,957
_RS01580
BWI76_RS01585: BWI76_RS01585 - transcriptional regulator, at 322,144 to 322,416
_RS01585
BWI76_RS01590: BWI76_RS01590 - hypothetical protein, at 322,429 to 323,121
_RS01590
BWI76_RS01595: BWI76_RS01595 - zinc resistance protein, at 323,134 to 323,556
_RS01595
Position (kb) 322
323 Strain fitness (log2 ratio) -1
0
1
2 at 321.201 kb on - strand, within BWI76_RS01575 at 321.201 kb on - strand, within BWI76_RS01575 at 321.201 kb on - strand, within BWI76_RS01575 at 321.201 kb on - strand, within BWI76_RS01575 at 321.210 kb on + strand, within BWI76_RS01575 at 321.211 kb on - strand, within BWI76_RS01575 at 321.246 kb on + strand, within BWI76_RS01575 at 321.263 kb on + strand at 321.617 kb on + strand, within BWI76_RS01580 at 321.625 kb on - strand, within BWI76_RS01580 at 321.888 kb on + strand, within BWI76_RS01580 at 322.181 kb on + strand, within BWI76_RS01585 at 322.181 kb on + strand at 322.189 kb on - strand, within BWI76_RS01585 at 322.220 kb on + strand, within BWI76_RS01585 at 322.289 kb on + strand, within BWI76_RS01585 at 322.305 kb on - strand, within BWI76_RS01585 at 322.310 kb on - strand, within BWI76_RS01585 at 322.329 kb on + strand, within BWI76_RS01585 at 322.419 kb on + strand at 322.419 kb on - strand at 322.608 kb on - strand, within BWI76_RS01590 at 322.640 kb on - strand, within BWI76_RS01590 at 322.756 kb on - strand, within BWI76_RS01590 at 322.772 kb on + strand, within BWI76_RS01590 at 322.772 kb on + strand, within BWI76_RS01590 at 322.780 kb on - strand, within BWI76_RS01590 at 322.952 kb on + strand, within BWI76_RS01590 at 322.973 kb on - strand, within BWI76_RS01590 at 323.025 kb on - strand, within BWI76_RS01590 at 323.054 kb on + strand at 323.085 kb on + strand at 323.085 kb on - strand at 323.173 kb on + strand at 323.173 kb on + strand at 323.181 kb on - strand, within BWI76_RS01595
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_glucose with MS_media 0.5x remove 321,201 - BWI76_RS01575 0.82 -0.3 321,201 - BWI76_RS01575 0.82 -0.8 321,201 - BWI76_RS01575 0.82 -0.9 321,201 - BWI76_RS01575 0.82 -0.2 321,210 + BWI76_RS01575 0.83 -0.3 321,211 - BWI76_RS01575 0.83 -0.3 321,246 + BWI76_RS01575 0.88 +0.5 321,263 + -0.5 321,617 + BWI76_RS01580 0.42 -0.6 321,625 - BWI76_RS01580 0.44 +0.7 321,888 + BWI76_RS01580 0.88 -0.5 322,181 + BWI76_RS01585 0.14 +0.4 322,181 + +1.6 322,189 - BWI76_RS01585 0.16 +0.6 322,220 + BWI76_RS01585 0.28 +0.5 322,289 + BWI76_RS01585 0.53 +1.0 322,305 - BWI76_RS01585 0.59 +0.5 322,310 - BWI76_RS01585 0.61 +0.5 322,329 + BWI76_RS01585 0.68 -0.5 322,419 + +0.2 322,419 - +2.0 322,608 - BWI76_RS01590 0.26 +0.0 322,640 - BWI76_RS01590 0.30 +0.1 322,756 - BWI76_RS01590 0.47 -0.5 322,772 + BWI76_RS01590 0.49 +1.0 322,772 + BWI76_RS01590 0.49 -0.3 322,780 - BWI76_RS01590 0.51 -0.1 322,952 + BWI76_RS01590 0.75 +0.5 322,973 - BWI76_RS01590 0.78 -0.3 323,025 - BWI76_RS01590 0.86 -0.1 323,054 + -0.5 323,085 + -0.2 323,085 - -0.6 323,173 + -0.2 323,173 + +0.1 323,181 - BWI76_RS01595 0.11 +0.8
Or see this region's nucleotide sequence