Experiment: BHIS with Chlorpromazine 0.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT4325 and BT4326 are separated by 45 nucleotides BT4326 and BT4327 are separated by 7 nucleotides
BT4325: BT4325 - hypothetical protein (NCBI ptt file), at 5,697,911 to 5,699,116
BT4325
BT4326: BT4326 - ABC transporter ATP-binding protein (NCBI ptt file), at 5,699,162 to 5,699,815
BT4326
BT4327: BT4327 - hypothetical protein (NCBI ptt file), at 5,699,823 to 5,701,370
BT4327
Position (kb) 5699
5700 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 5698.245 kb on + strand, within BT4325 at 5698.292 kb on + strand, within BT4325 at 5698.311 kb on + strand, within BT4325 at 5698.312 kb on - strand, within BT4325 at 5698.495 kb on + strand, within BT4325 at 5698.533 kb on + strand, within BT4325 at 5698.640 kb on - strand, within BT4325 at 5698.681 kb on + strand, within BT4325 at 5698.682 kb on - strand, within BT4325 at 5698.961 kb on - strand, within BT4325 at 5699.160 kb on + strand at 5699.161 kb on - strand at 5699.161 kb on - strand at 5699.197 kb on + strand at 5699.584 kb on - strand, within BT4326 at 5699.593 kb on + strand, within BT4326 at 5699.643 kb on + strand, within BT4326 at 5699.736 kb on - strand, within BT4326 at 5699.736 kb on - strand, within BT4326 at 5699.736 kb on - strand, within BT4326 at 5699.825 kb on - strand at 5699.825 kb on - strand at 5699.839 kb on - strand at 5699.934 kb on + strand at 5699.938 kb on + strand at 5699.939 kb on - strand at 5700.015 kb on + strand, within BT4327 at 5700.048 kb on - strand, within BT4327 at 5700.152 kb on - strand, within BT4327 at 5700.152 kb on - strand, within BT4327 at 5700.152 kb on - strand, within BT4327 at 5700.152 kb on - strand, within BT4327 at 5700.203 kb on - strand, within BT4327 at 5700.203 kb on - strand, within BT4327 at 5700.444 kb on - strand, within BT4327 at 5700.521 kb on - strand, within BT4327 at 5700.602 kb on - strand, within BT4327 at 5700.712 kb on + strand, within BT4327 at 5700.713 kb on - strand, within BT4327
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS with Chlorpromazine 0.1 mM remove 5,698,245 + BT4325 0.28 -0.0 5,698,292 + BT4325 0.32 -2.4 5,698,311 + BT4325 0.33 -1.9 5,698,312 - BT4325 0.33 -1.6 5,698,495 + BT4325 0.48 -0.0 5,698,533 + BT4325 0.52 -1.6 5,698,640 - BT4325 0.60 +0.5 5,698,681 + BT4325 0.64 -0.9 5,698,682 - BT4325 0.64 +2.0 5,698,961 - BT4325 0.87 -0.0 5,699,160 + -3.4 5,699,161 - -0.1 5,699,161 - -1.1 5,699,197 + -2.0 5,699,584 - BT4326 0.65 -2.1 5,699,593 + BT4326 0.66 -0.6 5,699,643 + BT4326 0.74 -5.6 5,699,736 - BT4326 0.88 -1.6 5,699,736 - BT4326 0.88 -3.5 5,699,736 - BT4326 0.88 +1.5 5,699,825 - -0.1 5,699,825 - +1.9 5,699,839 - +2.3 5,699,934 + -1.6 5,699,938 + +2.8 5,699,939 - -0.1 5,700,015 + BT4327 0.12 +1.5 5,700,048 - BT4327 0.15 -1.2 5,700,152 - BT4327 0.21 -0.7 5,700,152 - BT4327 0.21 -1.6 5,700,152 - BT4327 0.21 -0.9 5,700,152 - BT4327 0.21 -1.6 5,700,203 - BT4327 0.25 -1.6 5,700,203 - BT4327 0.25 +2.5 5,700,444 - BT4327 0.40 +1.9 5,700,521 - BT4327 0.45 +0.9 5,700,602 - BT4327 0.50 +2.9 5,700,712 + BT4327 0.57 -0.1 5,700,713 - BT4327 0.57 -0.8
Or see this region's nucleotide sequence