Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2075

Experiment: Formate/Acetate-Sulfite (60/1-20 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfite (60/1-20 mM)
2,157,555	-	cheY-2	DVU2073	0.15	-0.1
2,157,584	-	cheY-2	DVU2073	0.23	-0.3
2,157,664	+	cheY-2	DVU2073	0.45	-1.1
2,157,664	+	cheY-2	DVU2073	0.45	+0.4
2,157,672	-	cheY-2	DVU2073	0.47	-0.2
2,157,682	-	cheY-2	DVU2073	0.50	-1.3
2,157,682	-	cheY-2	DVU2073	0.50	+0.8
2,157,775	-	cheY-2	DVU2073	0.75	+0.8
2,157,782	+	cheY-2	DVU2073	0.77	+0.2
2,157,857	-				-0.1
2,157,948	-		DVU2074	0.11	-0.5
2,158,029	-		DVU2074	0.24	-0.8
2,158,099	+		DVU2074	0.34	-0.3
2,158,120	+		DVU2074	0.37	+0.1
2,158,208	+		DVU2074	0.51	-0.2
2,158,767	+	parA	DVU2075	0.32	-0.3
2,158,847	-	parA	DVU2075	0.42	-0.6
2,159,074	-	parA	DVU2075	0.71	-0.7
2,159,221	+				-0.3
2,159,228	+				+0.6
2,159,292	-				+0.7
2,159,292	-				-0.0
2,159,292	-				-1.5
2,159,345	+				-0.4
2,159,345	+				+0.5
2,159,345	+				-1.2
2,159,345	+				+0.5
2,159,353	-				-1.0
2,159,358	-				+0.0
2,159,555	+	cheR-2	DVU2076	0.24	-0.2
2,159,587	-	cheR-2	DVU2076	0.27	-0.2
2,159,613	+	cheR-2	DVU2076	0.30	-0.2
2,159,624	+	cheR-2	DVU2076	0.32	+0.3
2,159,639	-	cheR-2	DVU2076	0.33	-0.5
2,159,678	+	cheR-2	DVU2076	0.38	+1.1
2,159,849	+	cheR-2	DVU2076	0.57	-0.1
2,159,871	+	cheR-2	DVU2076	0.60	-0.7
2,159,874	-	cheR-2	DVU2076	0.60	-0.2
2,159,902	+	cheR-2	DVU2076	0.63	-0.2
2,160,024	+	cheR-2	DVU2076	0.77	-0.4
2,160,039	+	cheR-2	DVU2076	0.79	-1.0
2,160,098	-	cheR-2	DVU2076	0.85	-0.1
2,160,121	-	cheR-2	DVU2076	0.88	+0.0
2,160,138	+				-0.1
2,160,222	+				-0.4