Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1789
Experiment: Formate/Acetate-Sulfite (60/1-20 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfite (60/1-20 mM) |
|---|---|---|---|---|---|
| remove | |||||
| 1,854,471 | - | +0.8 | |||
| 1,854,491 | + | -0.2 | |||
| 1,854,636 | - | +0.1 | |||
| 1,854,696 | + | +0.0 | |||
| 1,854,742 | + | +0.4 | |||
| 1,854,807 | - | DVU1790 | 0.12 | -0.1 | |
| 1,854,847 | + | DVU1790 | 0.14 | +0.4 | |
| 1,854,897 | - | DVU1790 | 0.16 | +0.0 | |
| 1,854,907 | - | DVU1790 | 0.17 | -1.2 | |
| 1,855,098 | + | DVU1790 | 0.25 | +0.5 | |
| 1,855,324 | + | DVU1790 | 0.35 | +0.0 | |
| 1,855,357 | - | DVU1790 | 0.36 | -0.1 | |
| 1,855,359 | + | DVU1790 | 0.36 | -0.8 | |
| 1,855,387 | + | DVU1790 | 0.38 | -2.2 | |
| 1,855,388 | - | DVU1790 | 0.38 | -0.2 | |
| 1,855,438 | + | DVU1790 | 0.40 | +0.2 | |
| 1,855,443 | - | DVU1790 | 0.40 | +0.2 |
Or see this region's nucleotide sequence