Experiment: Formate/Acetate-Sulfite (60/1-20 mM)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2611 and DVU2612 are separated by 535 nucleotides DVU2612 and DVU2613 are separated by 46 nucleotides DVU2613 and DVU2614 are separated by 74 nucleotides
DVU2611: DVU2611 - conserved hypothetical protein (TIGR), at 2,729,301 to 2,730,860
DVU2611
DVU2612: DVU2612 - conserved hypothetical protein (TIGR), at 2,731,396 to 2,731,785
DVU2612
DVU2613: DVU2613 - hypothetical protein (TIGR), at 2,731,832 to 2,732,398
DVU2613
DVU2614: DVU2614 - hypothetical protein (TIGR), at 2,732,473 to 2,733,090
DVU2614
Position (kb)
2731
2732
2733 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2730.833 kb on + strand at 2730.880 kb on + strand at 2730.899 kb on + strand at 2730.899 kb on + strand at 2730.952 kb on + strand at 2730.952 kb on + strand at 2730.960 kb on - strand at 2730.960 kb on - strand at 2730.967 kb on + strand at 2730.989 kb on - strand at 2731.009 kb on - strand at 2731.033 kb on + strand at 2731.049 kb on + strand at 2731.155 kb on - strand at 2731.311 kb on - strand at 2731.376 kb on + strand at 2731.417 kb on - strand at 2731.417 kb on - strand at 2731.463 kb on + strand, within DVU2612 at 2731.519 kb on - strand, within DVU2612 at 2731.533 kb on + strand, within DVU2612 at 2731.710 kb on - strand, within DVU2612 at 2731.822 kb on - strand at 2732.463 kb on + strand at 2732.471 kb on - strand at 2732.506 kb on - strand at 2733.061 kb on + strand at 2733.085 kb on + strand at 2733.085 kb on + strand at 2733.085 kb on + strand at 2733.085 kb on + strand at 2733.085 kb on + strand at 2733.093 kb on - strand at 2733.093 kb on - strand at 2733.093 kb on - strand at 2733.098 kb on + strand at 2733.129 kb on + strand at 2733.147 kb on + strand at 2733.185 kb on + strand at 2733.207 kb on + strand at 2733.220 kb on + strand at 2733.260 kb on + strand at 2733.260 kb on + strand at 2733.260 kb on + strand at 2733.357 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Formate/Acetate-Sulfite (60/1-20 mM) remove 2,730,833 + -0.1 2,730,880 + -1.2 2,730,899 + -0.7 2,730,899 + -0.1 2,730,952 + -0.3 2,730,952 + +0.4 2,730,960 - -0.1 2,730,960 - -0.1 2,730,967 + -0.5 2,730,989 - -0.2 2,731,009 - -0.1 2,731,033 + -0.9 2,731,049 + -0.4 2,731,155 - -0.4 2,731,311 - +0.1 2,731,376 + +0.7 2,731,417 - -0.2 2,731,417 - -1.6 2,731,463 + DVU2612 0.17 -0.9 2,731,519 - DVU2612 0.32 -1.0 2,731,533 + DVU2612 0.35 -0.9 2,731,710 - DVU2612 0.81 -3.4 2,731,822 - -0.1 2,732,463 + -0.1 2,732,471 - +2.4 2,732,506 - -0.5 2,733,061 + +1.1 2,733,085 + -0.1 2,733,085 + +0.5 2,733,085 + -0.3 2,733,085 + +0.2 2,733,085 + -0.0 2,733,093 - -0.1 2,733,093 - -0.1 2,733,093 - +0.1 2,733,098 + +0.2 2,733,129 + -0.3 2,733,147 + +0.1 2,733,185 + +0.1 2,733,207 + -0.0 2,733,220 + +1.1 2,733,260 + +0.7 2,733,260 + -0.8 2,733,260 + -0.1 2,733,357 + -0.3
Or see this region's nucleotide sequence