Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5117

Experiment: L-Leucine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Leucine (C)
5,898,275	+		Pf6N2E2_5115	0.45	-1.1
5,898,275	+		Pf6N2E2_5115	0.45	-0.7
5,898,275	+		Pf6N2E2_5115	0.45	+1.1
5,898,276	-		Pf6N2E2_5115	0.45	+0.7
5,898,276	-		Pf6N2E2_5115	0.45	-0.5
5,898,408	-		Pf6N2E2_5115	0.74	+0.8
5,898,633	+		Pf6N2E2_5116	0.15	-1.6
5,898,634	-		Pf6N2E2_5116	0.15	+0.7
5,898,637	+		Pf6N2E2_5116	0.15	-3.1
5,898,637	+		Pf6N2E2_5116	0.15	+1.0
5,898,637	+		Pf6N2E2_5116	0.15	+1.4
5,898,637	+		Pf6N2E2_5116	0.15	-0.1
5,898,638	-		Pf6N2E2_5116	0.16	-0.1
5,898,638	-		Pf6N2E2_5116	0.16	-0.4
5,898,970	+		Pf6N2E2_5116	0.62	-0.2
5,898,970	+		Pf6N2E2_5116	0.62	+0.3
5,899,040	+		Pf6N2E2_5116	0.72	+0.4
5,899,112	-		Pf6N2E2_5116	0.82	-0.8
5,899,211	+				-2.0
5,899,211	+				+1.5
5,899,211	+				-0.0
5,899,212	-				-0.1
5,899,212	-				+0.0
5,899,212	-				+1.4
5,899,212	-				-0.0
5,899,212	-				+1.0
5,899,238	+				-0.7
5,899,238	+				+0.2
5,899,238	+				+0.6
5,899,238	+				+0.6
5,899,238	+				-1.4
5,899,238	+				+0.5
5,899,238	+				-1.4
5,899,239	-				+0.0
5,899,239	-				+1.1
5,899,239	-				+0.3
5,899,239	-				-2.2
5,899,239	-				+0.4
5,899,239	-				-1.5
5,899,467	+		Pf6N2E2_5117	0.43	-1.5
5,899,467	+		Pf6N2E2_5117	0.43	-3.3
5,899,467	+		Pf6N2E2_5117	0.43	+0.5
5,899,468	-		Pf6N2E2_5117	0.44	+0.8
5,899,468	-		Pf6N2E2_5117	0.44	-0.2
5,899,468	-		Pf6N2E2_5117	0.44	+0.1
5,899,468	-		Pf6N2E2_5117	0.44	+1.9
5,899,468	-		Pf6N2E2_5117	0.44	-0.3
5,899,468	-		Pf6N2E2_5117	0.44	-2.2
5,899,468	-		Pf6N2E2_5117	0.44	-0.4
5,899,484	+		Pf6N2E2_5117	0.47	-0.0
5,899,485	-		Pf6N2E2_5117	0.47	+1.5
5,899,590	+		Pf6N2E2_5117	0.69	-0.3
5,899,590	+		Pf6N2E2_5117	0.69	+0.2
5,899,590	+		Pf6N2E2_5117	0.69	-0.4
5,899,610	+		Pf6N2E2_5117	0.74	-0.7
5,899,611	-		Pf6N2E2_5117	0.74	-1.0
5,899,611	-		Pf6N2E2_5117	0.74	+1.2
5,899,611	-		Pf6N2E2_5117	0.74	+0.6
5,899,613	+		Pf6N2E2_5117	0.74	-1.8
5,899,613	+		Pf6N2E2_5117	0.74	-0.6
5,899,613	+		Pf6N2E2_5117	0.74	-1.5
5,899,614	-		Pf6N2E2_5117	0.75	-0.3
5,899,614	-		Pf6N2E2_5117	0.75	-0.5
5,899,614	-		Pf6N2E2_5117	0.75	+0.3
5,899,614	-		Pf6N2E2_5117	0.75	-2.4
5,899,643	+		Pf6N2E2_5117	0.81	+0.1
5,899,644	-		Pf6N2E2_5117	0.81	-1.0
5,899,644	-		Pf6N2E2_5117	0.81	+0.1
5,899,644	-		Pf6N2E2_5117	0.81	-2.2
5,899,660	-		Pf6N2E2_5117	0.84	-1.1
5,899,692	-				+0.8
5,899,719	+				-0.0
5,899,720	-				+0.8
5,899,720	-				+0.9
5,899,728	+				+1.1
5,899,728	+				+1.0
5,899,728	+				-2.5
5,899,728	+				-1.5
5,899,729	-				+1.0
5,899,729	-				+0.5
5,899,729	-				+1.0
5,899,729	-				-0.9
5,899,731	+				-0.1
5,899,731	+				+0.6
5,899,731	+				-0.5
5,899,731	+				-0.5
5,899,731	+				-0.3
5,899,732	-				-1.0
5,899,732	-				+0.7
5,899,732	-				-1.1
5,899,783	+				-1.4
5,899,783	+				-0.0
5,899,784	-				-0.6
5,899,802	-				+1.8
5,899,802	-				+0.2
5,899,899	+				-0.8
5,899,899	+				-0.1
5,899,899	+				+0.6
5,899,899	+				-2.2
5,899,899	+				+0.5
5,899,899	+				+0.1
5,899,899	+				-0.4
5,899,899	+				-0.5
5,899,899	+				-0.9
5,899,900	-				+0.2
5,899,900	-				-2.3
5,899,900	-				+0.6
5,899,900	-				+0.3
5,899,900	-				-0.4
5,899,900	-				-0.4
5,899,945	+				+0.3
5,899,945	+				+0.0
5,899,945	+				-1.4
5,899,945	+				-0.5
5,899,945	+				+0.4
5,899,945	+				+0.8
5,899,946	-				+1.3
5,899,946	-				-0.4
5,899,946	-				+1.2
5,899,946	-				-1.2
5,899,946	-				+0.1
5,899,946	-				+0.3
5,899,946	-				-2.7
5,899,946	-				+1.2
5,899,963	-				+0.4
5,899,981	+				-0.3
5,899,981	+				+0.3
5,899,981	+				+0.7
5,899,981	+				-1.2
5,899,981	+				+0.3
5,899,981	+				+1.5
5,899,981	+				-0.5
5,899,982	-				+2.0
5,900,018	+				-1.4
5,900,128	+		Pf6N2E2_5118	0.13	+1.3
5,900,130	+		Pf6N2E2_5118	0.13	-1.0
5,900,130	+		Pf6N2E2_5118	0.13	-1.9
5,900,130	+		Pf6N2E2_5118	0.13	-0.8
5,900,131	-		Pf6N2E2_5118	0.13	+0.2
5,900,137	-		Pf6N2E2_5118	0.13	-0.7
5,900,140	+		Pf6N2E2_5118	0.14	+0.4
5,900,140	+		Pf6N2E2_5118	0.14	+0.2
5,900,140	+		Pf6N2E2_5118	0.14	-0.5
5,900,141	-		Pf6N2E2_5118	0.14	-0.1
5,900,141	-		Pf6N2E2_5118	0.14	+2.3
5,900,141	-		Pf6N2E2_5118	0.14	-0.2
5,900,149	+		Pf6N2E2_5118	0.14	+0.3
5,900,150	-		Pf6N2E2_5118	0.14	-0.3
5,900,311	-		Pf6N2E2_5118	0.19	+0.4
5,900,311	-		Pf6N2E2_5118	0.19	-1.0
5,900,311	-		Pf6N2E2_5118	0.19	-0.8
5,900,311	-		Pf6N2E2_5118	0.19	-1.2
5,900,330	-		Pf6N2E2_5118	0.20	+0.3
5,900,401	+		Pf6N2E2_5118	0.22	-0.2
5,900,401	+		Pf6N2E2_5118	0.22	-0.2
5,900,401	+		Pf6N2E2_5118	0.22	+0.0
5,900,402	-		Pf6N2E2_5118	0.22	-0.0
5,900,402	-		Pf6N2E2_5118	0.22	+0.9
5,900,402	-		Pf6N2E2_5118	0.22	+0.9
5,900,402	-		Pf6N2E2_5118	0.22	-0.1
5,900,402	-		Pf6N2E2_5118	0.22	+1.2
5,900,402	-		Pf6N2E2_5118	0.22	-3.5
5,900,402	-		Pf6N2E2_5118	0.22	+0.8
5,900,402	-		Pf6N2E2_5118	0.22	+0.2
5,900,449	-		Pf6N2E2_5118	0.24	-0.0
5,900,468	-		Pf6N2E2_5118	0.24	+1.3
5,900,470	+		Pf6N2E2_5118	0.24	+0.3
5,900,470	+		Pf6N2E2_5118	0.24	+0.5
5,900,470	+		Pf6N2E2_5118	0.24	+0.6
5,900,471	-		Pf6N2E2_5118	0.24	-0.5
5,900,471	-		Pf6N2E2_5118	0.24	-0.1
5,900,507	-		Pf6N2E2_5118	0.25	+0.0
5,900,509	+		Pf6N2E2_5118	0.25	-2.9
5,900,509	+		Pf6N2E2_5118	0.25	+0.4
5,900,509	+		Pf6N2E2_5118	0.25	-0.5
5,900,509	+		Pf6N2E2_5118	0.25	+0.5
5,900,510	-		Pf6N2E2_5118	0.25	-0.7
5,900,530	+		Pf6N2E2_5118	0.26	-1.4
5,900,530	+		Pf6N2E2_5118	0.26	+1.9
5,900,530	+		Pf6N2E2_5118	0.26	+0.2
5,900,530	+		Pf6N2E2_5118	0.26	+0.3
5,900,531	-		Pf6N2E2_5118	0.26	-0.0
5,900,531	-		Pf6N2E2_5118	0.26	+0.1
5,900,531	-		Pf6N2E2_5118	0.26	-0.3
5,900,531	-		Pf6N2E2_5118	0.26	-1.0
5,900,531	-		Pf6N2E2_5118	0.26	+2.4
5,900,599	+		Pf6N2E2_5118	0.28	+0.0
5,900,599	+		Pf6N2E2_5118	0.28	+0.1
5,900,599	+		Pf6N2E2_5118	0.28	-1.5
5,900,599	+		Pf6N2E2_5118	0.28	+1.3
5,900,600	-		Pf6N2E2_5118	0.28	-0.1
5,900,600	-		Pf6N2E2_5118	0.28	+0.3
5,900,600	-		Pf6N2E2_5118	0.28	+0.9
5,900,661	+		Pf6N2E2_5118	0.30	+1.4
5,900,661	+		Pf6N2E2_5118	0.30	+1.0
5,900,661	+		Pf6N2E2_5118	0.30	+0.5
5,900,661	+		Pf6N2E2_5118	0.30	-1.5
5,900,662	-		Pf6N2E2_5118	0.30	-2.3
5,900,662	-		Pf6N2E2_5118	0.30	+1.4
5,900,662	-		Pf6N2E2_5118	0.30	-1.9
5,900,662	-		Pf6N2E2_5118	0.30	-1.0