Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03216

Experiment: PYE with CHIR-090 2 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 2 ug/mL
3,376,582	+		CCNA_03215	0.29	+0.3
3,376,583	+		CCNA_03215	0.30	+0.3
3,376,583	+		CCNA_03215	0.30	+0.1
3,376,591	-		CCNA_03215	0.30	-1.2
3,376,609	+		CCNA_03215	0.31	+0.2
3,376,617	-		CCNA_03215	0.32	-1.0
3,376,617	-		CCNA_03215	0.32	-1.0
3,376,630	+		CCNA_03215	0.33	+1.3
3,376,632	-				-0.7
3,376,677	-		CCNA_03215	0.36	-0.7
3,376,677	-		CCNA_03215	0.36	-0.4
3,376,706	+		CCNA_03215	0.38	-0.3
3,376,776	+		CCNA_03215	0.43	+0.7
3,376,816	+		CCNA_03215	0.46	+2.7
3,376,836	+		CCNA_03215	0.47	+0.1
3,376,894	+		CCNA_03215	0.51	+0.6
3,376,897	-				-0.1
3,376,902	-		CCNA_03215	0.52	-0.7
3,376,920	+		CCNA_03215	0.53	+0.2
3,376,920	+		CCNA_03215	0.53	-0.4
3,376,920	+		CCNA_03215	0.53	+0.5
3,376,920	+		CCNA_03215	0.53	+0.4
3,376,937	+		CCNA_03215	0.55	-1.5
3,376,942	+		CCNA_03215	0.55	+0.5
3,376,942	+		CCNA_03215	0.55	+1.2
3,376,955	-		CCNA_03215	0.56	-0.2
3,376,957	+		CCNA_03215	0.56	+0.2
3,376,960	-		CCNA_03215	0.56	-1.9
3,376,984	+		CCNA_03215	0.58	+0.2
3,376,994	+		CCNA_03215	0.59	+0.5
3,376,997	-		CCNA_03215	0.59	+0.0
3,377,002	-		CCNA_03215	0.59	-0.3
3,377,002	-		CCNA_03215	0.59	+0.2
3,377,063	+		CCNA_03215	0.63	+0.9
3,377,071	-		CCNA_03215	0.64	-1.0
3,377,119	+		CCNA_03215	0.67	+0.2
3,377,133	+		CCNA_03215	0.68	+0.4
3,377,162	+		CCNA_03215	0.70	-0.6
3,377,170	-		CCNA_03215	0.71	+0.5
3,377,172	+		CCNA_03215	0.71	+0.1
3,377,188	+		CCNA_03215	0.72	+0.3
3,377,238	+		CCNA_03215	0.76	+0.5
3,377,288	-		CCNA_03215	0.79	-0.8
3,377,319	+		CCNA_03215	0.81	+0.1
3,377,387	+		CCNA_03215	0.86	-0.2
3,377,389	-		CCNA_03215	0.86	-0.3
3,377,451	+				+0.2
3,377,473	-				-0.6
3,377,538	+				-0.6
3,377,554	-				+0.4
3,377,554	-				-0.2
3,377,565	+				+0.7
3,377,592	+				-0.1
3,377,599	+		CCNA_03216	0.11	+0.6
3,377,605	+		CCNA_03216	0.14	+0.2
3,377,613	-		CCNA_03216	0.18	+0.6
3,377,671	-		CCNA_03216	0.47	+0.2
3,377,734	+		CCNA_03216	0.78	+1.0
3,377,737	-		CCNA_03216	0.80	+0.4
3,377,738	+		CCNA_03216	0.80	+2.7
3,377,738	+		CCNA_03216	0.80	-0.7
3,377,744	+		CCNA_03216	0.83	+0.2
3,377,746	-		CCNA_03216	0.84	-0.1
3,377,767	+				-1.5
3,377,774	-				+0.1
3,377,780	-				+0.1
3,377,831	-				+0.4
3,377,831	-				+0.2
3,377,831	-				+0.3
3,377,831	-				+0.8
3,377,913	-				+0.5
3,377,951	+				-0.1
3,377,951	+				-0.4
3,377,954	-				+0.3
3,377,968	+				-1.2
3,377,968	+				+0.9
3,377,976	-				-0.6
3,377,995	-				+0.3
3,378,029	-		CCNA_03217	0.12	+0.2
3,378,050	+		CCNA_03217	0.15	+0.3
3,378,089	+		CCNA_03217	0.21	-0.3
3,378,234	+		CCNA_03217	0.44	-0.8
3,378,254	+		CCNA_03217	0.47	-1.6
3,378,287	+		CCNA_03217	0.52	-0.9
3,378,287	+		CCNA_03217	0.52	+1.8
3,378,287	+		CCNA_03217	0.52	-0.5
3,378,287	+		CCNA_03217	0.52	+0.8
3,378,287	+		CCNA_03217	0.52	-0.7
3,378,287	+		CCNA_03217	0.52	+0.5
3,378,287	+		CCNA_03217	0.52	-1.7
3,378,287	+		CCNA_03217	0.52	+1.6
3,378,288	-		CCNA_03217	0.53	+0.6
3,378,288	-		CCNA_03217	0.53	+0.1
3,378,288	-		CCNA_03217	0.53	+0.1
3,378,295	-		CCNA_03217	0.54	+0.8
3,378,295	-		CCNA_03217	0.54	-0.1
3,378,295	-		CCNA_03217	0.54	-1.0
3,378,295	-		CCNA_03217	0.54	-0.7
3,378,295	-		CCNA_03217	0.54	-0.4
3,378,295	-		CCNA_03217	0.54	+1.1
3,378,295	-		CCNA_03217	0.54	+0.2
3,378,314	-		CCNA_03217	0.57	+0.0
3,378,343	+		CCNA_03217	0.61	-0.4
3,378,384	-		CCNA_03217	0.68	+0.4
3,378,406	+				-0.7
3,378,465	+		CCNA_03217	0.81	+0.9
3,378,499	-		CCNA_03217	0.86	-0.4
3,378,499	-		CCNA_03217	0.86	+0.5
3,378,501	+		CCNA_03217	0.86	+1.5
3,378,501	+		CCNA_03217	0.86	-2.3
3,378,501	+		CCNA_03217	0.86	-0.8
3,378,501	+		CCNA_03217	0.86	+2.2
3,378,501	+		CCNA_03217	0.86	-0.0
3,378,501	+		CCNA_03217	0.86	-1.1
3,378,501	+		CCNA_03217	0.86	-0.0
3,378,509	-		CCNA_03217	0.88	+1.8
3,378,509	-		CCNA_03217	0.88	+0.1
3,378,509	-		CCNA_03217	0.88	+0.9
3,378,509	-		CCNA_03217	0.88	-0.3
3,378,546	-				+0.6
3,378,555	-				+0.8
3,378,578	-				-2.7
3,378,578	-				+0.7
3,378,593	-				+0.5
3,378,603	-				+0.2
3,378,712	+				-1.4
3,378,757	-				+2.7