Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03016

Experiment: PYE with CHIR-090 2 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 2 ug/mL
3,167,704	+		CCNA_03014	0.16	-0.9
3,167,704	+		CCNA_03014	0.16	-0.8
3,167,739	+		CCNA_03014	0.19	+0.1
3,167,740	-		CCNA_03014	0.20	+0.0
3,167,745	-		CCNA_03014	0.20	+0.7
3,167,774	-		CCNA_03014	0.23	+0.9
3,167,794	+		CCNA_03014	0.26	-0.4
3,167,799	+		CCNA_03014	0.26	+1.8
3,167,824	-		CCNA_03014	0.29	+0.4
3,167,843	-				-0.3
3,167,843	-		CCNA_03014	0.31	-0.2
3,167,843	-		CCNA_03014	0.31	-0.3
3,167,871	+		CCNA_03014	0.34	-1.6
3,167,871	+		CCNA_03014	0.34	+0.3
3,167,910	-		CCNA_03014	0.39	+0.3
3,167,926	-		CCNA_03014	0.40	+0.8
3,167,940	-		CCNA_03014	0.42	-0.1
3,168,048	-		CCNA_03014	0.54	-1.6
3,168,069	+		CCNA_03014	0.56	+0.9
3,168,115	+		CCNA_03014	0.62	-0.8
3,168,116	+		CCNA_03014	0.62	-0.8
3,168,184	+		CCNA_03014	0.69	-1.9
3,168,184	+		CCNA_03014	0.69	+0.8
3,168,190	-		CCNA_03014	0.70	-0.5
3,168,192	-		CCNA_03014	0.70	+0.6
3,168,192	-		CCNA_03014	0.70	-2.0
3,168,409	+				+1.8
3,168,452	+				-1.1
3,168,463	+		CCNA_03015	0.14	+0.4
3,168,499	-		CCNA_03015	0.28	-0.3
3,168,504	+		CCNA_03015	0.30	+1.3
3,168,504	+		CCNA_03015	0.30	-1.1
3,168,512	-		CCNA_03015	0.33	+0.4
3,168,512	-		CCNA_03015	0.33	+0.1
3,168,512	-		CCNA_03015	0.33	+0.9
3,168,562	+		CCNA_03015	0.52	+0.1
3,168,620	+		CCNA_03015	0.75	-0.4
3,168,625	+		CCNA_03015	0.77	-0.1
3,168,625	+		CCNA_03015	0.77	-2.1
3,168,626	+		CCNA_03015	0.77	+0.6
3,168,626	+		CCNA_03015	0.77	-0.2
3,168,626	+		CCNA_03015	0.77	+0.6
3,168,642	+		CCNA_03015	0.83	-0.6
3,168,642	+		CCNA_03015	0.83	-1.1
3,168,651	-		CCNA_03015	0.87	-0.6
3,168,660	+				-0.0
3,168,687	-				-1.1
3,168,748	+		CCNA_03016	0.10	-0.3
3,168,787	+		CCNA_03016	0.18	-0.5
3,168,810	-		CCNA_03016	0.23	-1.3
3,168,827	-		CCNA_03016	0.26	-0.1
3,168,935	-		CCNA_03016	0.48	+0.7
3,168,961	-		CCNA_03016	0.53	-0.1
3,168,963	+		CCNA_03016	0.54	-1.3
3,168,971	-		CCNA_03016	0.55	+0.5
3,168,980	+		CCNA_03016	0.57	-2.8
3,168,988	-		CCNA_03016	0.59	+0.2
3,168,988	-		CCNA_03016	0.59	-0.6
3,169,001	-		CCNA_03016	0.61	-0.1
3,169,023	-		CCNA_03016	0.66	+0.4
3,169,026	-		CCNA_03016	0.66	-0.2
3,169,072	-		CCNA_03016	0.76	-0.4
3,169,141	-		CCNA_03016	0.89	+1.2
3,169,143	-		CCNA_03016	0.90	-0.4
3,169,144	+				-1.4
3,169,162	-				+0.5
3,169,162	-				-0.1
3,169,166	+				-0.5
3,169,201	+				-0.1
3,169,201	+				-0.7
3,169,268	+				+0.1
3,169,286	-				-0.8
3,169,302	-		CCNA_03017	0.11	+0.0
3,169,302	-		CCNA_03017	0.11	+1.0
3,169,332	-		CCNA_03017	0.14	-1.1
3,169,372	+		CCNA_03017	0.18	-0.3
3,169,394	+		CCNA_03017	0.21	-0.1
3,169,402	-		CCNA_03017	0.21	-0.4
3,169,418	+		CCNA_03017	0.23	+0.9
3,169,433	+		CCNA_03017	0.25	-0.8
3,169,491	-		CCNA_03017	0.31	+0.7
3,169,560	-		CCNA_03017	0.39	+0.4
3,169,580	-		CCNA_03017	0.41	-0.0
3,169,604	-		CCNA_03017	0.43	+0.7
3,169,638	+		CCNA_03017	0.47	-0.2
3,169,668	-		CCNA_03017	0.50	-0.9
3,169,690	+		CCNA_03017	0.53	+0.3
3,169,702	-		CCNA_03017	0.54	-1.7
3,169,705	+		CCNA_03017	0.54	+0.4
3,169,705	+		CCNA_03017	0.54	-0.0
3,169,713	-		CCNA_03017	0.55	+0.6
3,169,730	+		CCNA_03017	0.57	-2.2
3,169,738	-		CCNA_03017	0.58	-1.6
3,169,791	-		CCNA_03017	0.63	-0.2
3,169,809	+		CCNA_03017	0.65	-0.6
3,169,822	+		CCNA_03017	0.67	+0.4
3,169,846	+		CCNA_03017	0.69	+1.3
3,169,858	+		CCNA_03017	0.71	+0.3
3,169,884	-		CCNA_03017	0.73	-0.1
3,169,918	+		CCNA_03017	0.77	+0.7
3,169,941	-		CCNA_03017	0.80	+1.0
3,169,941	-		CCNA_03017	0.80	+1.2
3,169,967	+		CCNA_03017	0.82	-0.5
3,169,975	-		CCNA_03017	0.83	+0.1
3,169,998	+		CCNA_03017	0.86	+0.5
3,170,038	+				-0.3
3,170,043	+				-0.0
3,170,043	+				+0.2
3,170,068	+				-0.9
3,170,076	-				+1.2
3,170,076	-				-0.6
3,170,083	-				-0.9
3,170,088	-				+1.1
3,170,115	-				-1.3
3,170,135	+				+0.1
3,170,143	-				+0.3
3,170,143	-				-1.4
3,170,151	+				-0.6
3,170,191	-				-1.0
3,170,191	-				+0.2
3,170,191	-				+0.2
3,170,191	-				-2.3