Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02452

Experiment: PYE with CHIR-090 2 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 2 ug/mL
2,590,984	+		CCNA_02450	0.54	+0.7
2,590,984	+		CCNA_02450	0.54	+1.4
2,590,986	-		CCNA_02450	0.55	-2.1
2,590,986	-		CCNA_02450	0.55	-0.1
2,591,043	+		CCNA_02450	0.68	+0.9
2,591,055	-		CCNA_02450	0.71	+0.2
2,591,072	+		CCNA_02450	0.75	+0.0
2,591,085	-		CCNA_02450	0.78	-0.3
2,591,106	+		CCNA_02450	0.83	+0.5
2,591,134	+		CCNA_02450	0.89	+1.8
2,591,143	+				+1.6
2,591,151	-				-1.5
2,591,153	+				-0.6
2,591,173	-				-2.2
2,591,176	+				+0.3
2,591,176	+				+0.3
2,591,176	+				+0.5
2,591,176	+				+1.2
2,591,176	+				+0.7
2,591,184	-				-1.2
2,591,226	+				-1.1
2,591,251	+				-0.8
2,591,260	+		CCNA_02451	0.11	+0.2
2,591,287	+		CCNA_02451	0.15	+0.4
2,591,287	+		CCNA_02451	0.15	-0.8
2,591,292	+		CCNA_02451	0.16	+0.3
2,591,297	+		CCNA_02451	0.16	-2.1
2,591,310	-		CCNA_02451	0.18	+0.3
2,591,322	+		CCNA_02451	0.20	+1.0
2,591,322	+		CCNA_02451	0.20	+0.6
2,591,322	+		CCNA_02451	0.20	-0.1
2,591,330	-		CCNA_02451	0.22	-3.3
2,591,373	+		CCNA_02451	0.28	-1.2
2,591,404	-		CCNA_02451	0.33	-1.3
2,591,462	+		CCNA_02451	0.42	+0.4
2,591,469	+		CCNA_02451	0.43	+0.7
2,591,470	-		CCNA_02451	0.43	+0.2
2,591,478	-		CCNA_02451	0.44	+0.1
2,591,505	+		CCNA_02451	0.49	-0.1
2,591,509	+		CCNA_02451	0.49	-0.8
2,591,509	+		CCNA_02451	0.49	-0.2
2,591,557	+		CCNA_02451	0.57	-0.1
2,591,628	+		CCNA_02451	0.68	+1.0
2,591,658	+		CCNA_02451	0.72	-0.1
2,591,680	+		CCNA_02451	0.76	-0.2
2,591,730	+		CCNA_02451	0.84	-0.0
2,591,737	+		CCNA_02451	0.85	+0.1
2,591,737	+		CCNA_02451	0.85	-1.8
2,591,742	+		CCNA_02451	0.85	+1.1
2,591,745	-		CCNA_02451	0.86	+0.4
2,591,836	+				-0.4
2,591,844	-				+0.0
2,591,971	+				+0.2
2,591,995	+				-0.3
2,592,002	+				+0.7
2,592,003	-				+0.0
2,592,007	+				+0.8
2,592,010	-				-0.8
2,592,020	+				+0.6
2,592,070	+		CCNA_02452	0.18	+0.8
2,592,078	-		CCNA_02452	0.19	+1.3
2,592,092	+		CCNA_02452	0.22	+0.9
2,592,093	-		CCNA_02452	0.22	+0.6
2,592,149	+		CCNA_02452	0.34	+0.4
2,592,157	-		CCNA_02452	0.35	+0.4
2,592,172	-		CCNA_02452	0.38	+0.2
2,592,195	+		CCNA_02452	0.43	-0.2
2,592,206	-		CCNA_02452	0.45	-0.8
2,592,219	-		CCNA_02452	0.48	-1.8
2,592,277	+		CCNA_02452	0.59	-0.4
2,592,306	+		CCNA_02452	0.65	-1.4
2,592,306	+		CCNA_02452	0.65	+1.4
2,592,314	-		CCNA_02452	0.67	+0.5
2,592,345	-		CCNA_02452	0.73	+0.7
2,592,389	+		CCNA_02452	0.82	+0.8
2,592,397	-		CCNA_02452	0.84	+0.5
2,592,460	+				-0.3
2,592,462	+				+0.8
2,592,470	-				-1.4
2,592,472	+				-0.1
2,592,480	-				-0.7
2,592,503	+				-0.1
2,592,512	-				-2.1
2,592,537	+				+0.4
2,592,562	+		CCNA_02453	0.14	-1.6
2,592,572	+		CCNA_02453	0.16	-0.7
2,592,624	-		CCNA_02453	0.27	-1.3
2,592,631	+		CCNA_02453	0.28	-0.6
2,592,692	-				-0.3
2,592,709	-		CCNA_02453	0.44	+1.0
2,592,713	-		CCNA_02453	0.44	-0.4
2,592,736	+		CCNA_02453	0.49	+2.8
2,592,756	+		CCNA_02453	0.53	+0.8
2,592,918	+		CCNA_02453	0.85	-0.3
2,592,921	-		CCNA_02453	0.86	-1.1
2,592,944	-				-1.4
2,592,982	-				-1.4
2,593,018	+				-0.5
2,593,064	+				+0.1
2,593,064	+				-2.1
2,593,064	+				+2.6
2,593,073	-				+0.2
2,593,073	-				-0.7
2,593,078	-				-0.2
2,593,109	-				+0.3
2,593,110	+				+0.5
2,593,110	+				-1.0
2,593,276	+				-0.6
2,593,276	+				-1.4
2,593,279	-				+1.6
2,593,284	-				-1.4
2,593,284	-				-0.3
2,593,300	+				-0.6
2,593,300	+				-0.7
2,593,308	-				+0.3
2,593,315	+				+0.0
2,593,334	+				+0.1
2,593,342	-		CCNA_02454	0.10	+0.6
2,593,342	-		CCNA_02454	0.10	-0.6
2,593,342	-		CCNA_02454	0.10	+1.4
2,593,342	-		CCNA_02454	0.10	-0.1
2,593,342	-		CCNA_02454	0.10	+0.0
2,593,342	-		CCNA_02454	0.10	-0.3
2,593,342	-		CCNA_02454	0.10	+0.2
2,593,342	-		CCNA_02454	0.10	+0.4
2,593,342	-		CCNA_02454	0.10	-0.4
2,593,390	-		CCNA_02454	0.12	-0.9
2,593,431	-		CCNA_02454	0.13	+0.4
2,593,442	+		CCNA_02454	0.13	-0.5
2,593,462	+		CCNA_02454	0.14	+0.5