Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01975

Experiment: PYE with CHIR-090 2 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 2 ug/mL
2,118,881	+				+0.1
2,119,002	+		CCNA_01973	0.27	+1.1
2,119,010	-		CCNA_01973	0.31	-1.9
2,119,018	-		CCNA_01973	0.35	+0.2
2,119,085	+		CCNA_01973	0.67	-0.8
2,119,085	+		CCNA_01973	0.67	+1.2
2,119,085	+		CCNA_01973	0.67	-1.1
2,119,085	+		CCNA_01973	0.67	-3.4
2,119,093	-		CCNA_01973	0.70	+0.6
2,119,093	-		CCNA_01973	0.70	-0.4
2,119,100	-		CCNA_01973	0.74	+0.4
2,119,115	-		CCNA_01973	0.81	+2.6
2,119,128	+		CCNA_01973	0.87	-0.7
2,119,136	-				+0.2
2,119,148	+				+1.0
2,119,156	-				-1.3
2,119,166	+				+0.2
2,119,183	+				+0.1
2,119,191	-				-1.1
2,119,217	+				+0.4
2,119,220	+				+0.0
2,119,228	-				-0.5
2,119,240	+				-1.1
2,119,240	+				-1.1
2,119,306	-				+0.4
2,119,312	+				-1.3
2,119,322	+				+0.6
2,119,356	+		CCNA_01974	0.14	+0.5
2,119,366	+		CCNA_01974	0.16	-0.1
2,119,443	+		CCNA_01974	0.29	+1.2
2,119,462	+		CCNA_01974	0.32	+0.3
2,119,478	+		CCNA_01974	0.35	-0.2
2,119,505	+		CCNA_01974	0.39	+1.7
2,119,556	-		CCNA_01974	0.48	-0.5
2,119,578	+		CCNA_01974	0.52	-1.5
2,119,586	-		CCNA_01974	0.53	-0.1
2,119,586	-		CCNA_01974	0.53	-1.4
2,119,596	-		CCNA_01974	0.55	-2.3
2,119,599	+		CCNA_01974	0.55	-1.7
2,119,611	+		CCNA_01974	0.57	-0.5
2,119,611	+		CCNA_01974	0.57	+0.2
2,119,618	+		CCNA_01974	0.58	+0.0
2,119,631	-		CCNA_01974	0.60	-0.1
2,119,653	+		CCNA_01974	0.64	+0.4
2,119,653	-		CCNA_01974	0.64	-0.5
2,119,655	+		CCNA_01974	0.64	+0.5
2,119,688	+		CCNA_01974	0.70	-1.2
2,119,688	+		CCNA_01974	0.70	+0.7
2,119,688	+		CCNA_01974	0.70	+1.2
2,119,688	+		CCNA_01974	0.70	+0.2
2,119,688	+		CCNA_01974	0.70	+0.3
2,119,722	+		CCNA_01974	0.76	+0.5
2,119,722	+		CCNA_01974	0.76	-0.6
2,119,722	+		CCNA_01974	0.76	+0.5
2,119,730	-		CCNA_01974	0.77	+1.3
2,119,730	-		CCNA_01974	0.77	-0.1
2,119,737	+		CCNA_01974	0.78	-0.1
2,119,740	-		CCNA_01974	0.79	-1.4
2,119,745	-		CCNA_01974	0.80	-0.1
2,119,745	-		CCNA_01974	0.80	+0.2
2,119,796	+		CCNA_01974	0.88	+1.4
2,119,806	+		CCNA_01974	0.90	-0.3
2,119,833	-				-0.3
2,119,860	+				-0.7
2,119,860	+				+0.4
2,119,860	+				+0.4
2,119,860	+				-0.3
2,119,875	-				+0.6
2,119,885	+				+0.2
2,119,886	+				-1.4
2,119,894	-				-2.2
2,119,917	+				+0.5
2,119,939	+				+0.4
2,119,998	+		CCNA_01975	0.12	+0.1
2,120,145	+		CCNA_01975	0.26	+1.2
2,120,155	-		CCNA_01975	0.27	+0.5
2,120,196	-		CCNA_01975	0.31	+0.2
2,120,255	-		CCNA_01975	0.37	-1.4
2,120,294	+		CCNA_01975	0.41	+0.3
2,120,301	+		CCNA_01975	0.42	-0.8
2,120,302	-		CCNA_01975	0.42	-3.4
2,120,306	+		CCNA_01975	0.42	+0.2
2,120,323	+		CCNA_01975	0.44	+1.0
2,120,400	+		CCNA_01975	0.51	+1.2
2,120,400	+		CCNA_01975	0.51	-0.3
2,120,408	-		CCNA_01975	0.52	-0.7
2,120,408	-		CCNA_01975	0.52	-0.6
2,120,444	-		CCNA_01975	0.55	+0.9
2,120,476	+		CCNA_01975	0.59	-0.0
2,120,496	+		CCNA_01975	0.61	+2.0
2,120,496	+		CCNA_01975	0.61	+1.3
2,120,504	-		CCNA_01975	0.61	-0.7
2,120,522	+		CCNA_01975	0.63	+0.9
2,120,525	-		CCNA_01975	0.63	-0.1
2,120,532	+		CCNA_01975	0.64	+0.3
2,120,612	+		CCNA_01975	0.72	+1.0
2,120,632	+		CCNA_01975	0.74	+0.8
2,120,637	+		CCNA_01975	0.74	+0.8
2,120,697	+		CCNA_01975	0.80	+1.1
2,120,697	+		CCNA_01975	0.80	-0.4
2,120,697	+		CCNA_01975	0.80	+0.6
2,120,697	+		CCNA_01975	0.80	+0.2
2,120,699	+		CCNA_01975	0.80	+1.0
2,120,700	-		CCNA_01975	0.80	-1.8
2,120,706	+		CCNA_01975	0.81	+0.4
2,120,745	+		CCNA_01975	0.85	+1.8
2,120,748	-		CCNA_01975	0.85	+0.1
2,120,758	-		CCNA_01975	0.86	+0.7
2,120,787	+		CCNA_01975	0.89	+0.0
2,120,787	+		CCNA_01975	0.89	-0.5
2,120,787	+		CCNA_01975	0.89	+0.4
2,120,795	-		CCNA_01975	0.90	+0.1
2,120,795	-		CCNA_01975	0.90	+1.3
2,120,795	-		CCNA_01975	0.90	+0.1
2,120,806	-				-0.2
2,120,806	-				+0.2
2,120,820	+				+1.0
2,120,843	+				+1.4
2,120,901	+				+0.5
2,120,911	+				-0.2
2,120,919	-				-1.2
2,120,965	+				+1.8
2,120,965	+				+1.1
2,121,027	+		CCNA_01976	0.16	-1.5
2,121,098	+		CCNA_01976	0.25	-0.4
2,121,098	+		CCNA_01976	0.25	+0.3
2,121,098	+		CCNA_01976	0.25	-0.4
2,121,098	+		CCNA_01976	0.25	-0.1
2,121,122	+		CCNA_01976	0.29	+0.5
2,121,142	-		CCNA_01976	0.31	+0.2
2,121,168	+		CCNA_01976	0.34	-0.5
2,121,252	-		CCNA_01976	0.45	+0.5
2,121,346	+		CCNA_01976	0.57	-0.0
2,121,385	+		CCNA_01976	0.62	+0.2
2,121,396	+		CCNA_01976	0.63	+0.5
2,121,407	+		CCNA_01976	0.65	+0.7
2,121,452	+		CCNA_01976	0.70	-0.2
2,121,452	+		CCNA_01976	0.70	-0.8
2,121,524	+		CCNA_01976	0.79	+0.5
2,121,529	+		CCNA_01976	0.80	+0.2
2,121,607	+				-0.4
2,121,615	-				-2.1
2,121,615	-				-0.8
2,121,620	-				-1.8
2,121,620	-				-0.4
2,121,650	+				-0.3
2,121,689	-				+0.8
2,121,786	-				+0.4
2,121,799	+				-1.8
2,121,817	+				+0.3
2,121,833	-				+0.6