Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35780

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,616,585	-		BPHYT_RS35775	0.65	+0.1
3,616,793	-		BPHYT_RS35775	0.81	+1.7
3,616,996	+				+0.5
3,617,367	+		BPHYT_RS35780	0.22	-0.2
3,617,473	+		BPHYT_RS35780	0.30	-0.1
3,617,604	-		BPHYT_RS35780	0.40	-0.3
3,617,840	-		BPHYT_RS35780	0.57	-1.2
3,617,963	+		BPHYT_RS35780	0.66	-0.7
3,618,041	-		BPHYT_RS35780	0.72	+0.3
3,618,440	-				-0.2
3,618,608	+		BPHYT_RS35785	0.24	+0.8
3,618,609	-		BPHYT_RS35785	0.24	-2.3
3,618,725	-		BPHYT_RS35785	0.39	+0.6
3,618,920	+		BPHYT_RS35785	0.63	+0.2
3,619,237	+				-0.2
3,619,238	-				+0.1
3,619,262	+				-3.5
3,619,262	+				-3.6
3,619,262	+				-0.6
3,619,263	-				+0.4
3,619,340	+				-0.7
3,619,340	+				-0.1
3,619,341	-				-1.8
3,619,341	-				-0.4
3,619,350	+				+2.4
3,619,365	-				+0.9
3,619,366	+				+0.7