Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35325
Experiment: Phenylacetic 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Phenylacetic 5 mM (C) |
---|---|---|---|---|---|
remove | |||||
3,522,833 | + | +0.8 | |||
3,523,180 | + | BPHYT_RS35320 | 0.17 | +1.2 | |
3,523,324 | + | BPHYT_RS35320 | 0.36 | -0.6 | |
3,523,382 | - | BPHYT_RS35320 | 0.44 | -1.5 | |
3,523,862 | + | +0.7 | |||
3,523,934 | + | -0.1 | |||
3,524,485 | - | BPHYT_RS35325 | 0.48 | +0.6 | |
3,524,485 | - | BPHYT_RS35325 | 0.48 | +0.4 | |
3,524,485 | - | BPHYT_RS35325 | 0.48 | -0.2 | |
3,524,921 | - | BPHYT_RS35325 | 0.79 | +0.1 |
Or see this region's nucleotide sequence