Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35140

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,487,397	+		BPHYT_RS35135	0.63	+0.7
3,487,443	-		BPHYT_RS35135	0.66	-0.6
3,487,496	+		BPHYT_RS35135	0.69	+0.8
3,487,496	+		BPHYT_RS35135	0.69	+0.8
3,487,497	-		BPHYT_RS35135	0.69	+0.2
3,487,767	-		BPHYT_RS35135	0.86	+1.0
3,487,887	-				-0.1
3,488,133	+				+0.5
3,488,707	+		BPHYT_RS35140	0.65	-0.4
3,488,708	-		BPHYT_RS35140	0.65	-1.0
3,488,788	-		BPHYT_RS35140	0.75	-0.0
3,488,909	+				-0.6
3,488,909	+				+0.4
3,489,259	+		BPHYT_RS35145	0.42	+2.1
3,489,260	-		BPHYT_RS35145	0.42	-0.3
3,489,322	+		BPHYT_RS35145	0.53	-0.5
3,489,415	+		BPHYT_RS35145	0.69	+0.7
3,489,418	+		BPHYT_RS35145	0.69	-2.3
3,489,418	+		BPHYT_RS35145	0.69	+0.9
3,489,457	+		BPHYT_RS35145	0.76	+0.3
3,489,458	-		BPHYT_RS35145	0.76	+0.8
3,489,651	-				+0.6
3,489,949	+		BPHYT_RS35150	0.33	-1.0
3,489,950	-		BPHYT_RS35150	0.33	+3.7