Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34525

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,352,350	+				-0.2
3,352,351	-				+0.8
3,352,375	+				+0.6
3,352,384	-				-0.4
3,352,628	-		BPHYT_RS34520	0.28	-2.0
3,352,628	-		BPHYT_RS34520	0.28	-2.8
3,352,798	+		BPHYT_RS34520	0.46	+1.1
3,352,802	+		BPHYT_RS34520	0.47	-0.4
3,352,803	-		BPHYT_RS34520	0.47	+0.0
3,352,871	+		BPHYT_RS34520	0.54	+0.2
3,353,066	-		BPHYT_RS34520	0.74	+0.5
3,353,162	+		BPHYT_RS34520	0.84	+5.6
3,353,180	+		BPHYT_RS34520	0.86	+1.1
3,353,387	-				+0.4
3,353,448	-		BPHYT_RS34525	0.12	-1.6
3,353,551	-		BPHYT_RS34525	0.20	-3.5
3,353,795	-		BPHYT_RS34525	0.41	-0.5
3,353,795	-		BPHYT_RS34525	0.41	+0.1
3,353,859	+		BPHYT_RS34525	0.46	+2.1
3,354,325	-		BPHYT_RS34525	0.85	-1.5
3,354,543	+				-0.6
3,354,544	-				+0.5
3,354,544	-				-2.1
3,354,544	-				-1.6
3,354,790	-		BPHYT_RS34530	0.19	-2.6
3,354,807	-		BPHYT_RS34530	0.21	+0.8