Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34505

Experiment: Phenylacetic 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Phenylacetic 5 mM (C)
3,347,881	-				+0.2
3,347,881	-				+0.6
3,348,031	-		BPHYT_RS34500	0.19	+0.6
3,348,184	-		BPHYT_RS34500	0.60	-1.8
3,348,217	-		BPHYT_RS34500	0.69	+0.2
3,348,672	-		BPHYT_RS34505	0.32	+1.9
3,348,747	+		BPHYT_RS34505	0.45	+0.4
3,348,748	-		BPHYT_RS34505	0.45	-0.4
3,349,008	+				-1.1
3,349,110	+				-4.5
3,349,111	-				+2.7
3,349,111	-				+0.5
3,349,123	+				+0.7
3,349,127	-				+0.1
3,349,356	-				+0.7
3,349,582	+		BPHYT_RS34510	0.13	-0.4
3,349,993	+		BPHYT_RS34510	0.39	-0.3
3,350,050	+		BPHYT_RS34510	0.43	+0.1
3,350,050	+		BPHYT_RS34510	0.43	-3.4
3,350,051	-		BPHYT_RS34510	0.43	+2.9